Bibliography

This bibliography includes all the papers referenced by DisProt, papers that have cited several key references on disordered proteins, and additional papers found by key word searches. The list is sorted by the first author's last name. Click here to see the distribution per year of the papers in the bibliography.
Last update on June 23rd, 2006. Total number of papers in this bibliography: 2785.

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K

Kaberdin VR, Miczak A, Jakobsen JS, Lin-Chao S, McDowall KJ, von Gabain A. "The endoribonucleolytic N-terminal half of Escherichia coli RNase E is evolutionarily conserved in Synechocystis sp. and other bacteria but not the C-terminal half, which is sufficient for degradosome assembly." Proc Natl Acad Sci U S A. 1998; 95(20): 11637-11642. PMID: 9751718
 
Kadirvelraj R, Gonzalez-Outeirino J, Foley BL, Beckham ML, Jennings HJ, Foote S, Ford MG, Woods RJ. "Understanding the bacterial polysaccharide antigenicity of Streptococcus agalactiae versus Streptococcus pneumoniae." Proc Natl Acad Sci U S A. 2006; 103(21): 8149-54. PMID: 16705032
 
Kaiser M, De Cian A, Sainlos M, Renner C, Mergny JL, Teulade-Fichou MP. "Neomycin-capped aromatic platforms: quadruplex DNA recognition and telomerase inhibition." Org Biomol Chem. 2006; 4(6): 1049-57. PMID: 16525549
 
Kajava AV. "alpha-Helical solenoid model for the human involucrin." FEBS Letters. 2000; 473(2): 127-131. PMID: 10812058
 
Kalodimos CG, Boelens R, Kaptein R. "Toward an integrated model of protein-DNA recognition as inferred from NMR studies on the Lac repressor system." Chem Rev. 2004; 104(8): 3567-86. PMID: 15303828
 
Kalodimos CG, Boelens R, Kaptein R. "A residue-specific view of the association and dissociation pathway in protein--DNA recognition." Nat Struct Biol. 2002; 9(3): 193-7. PMID: 11850636
 
Kalthoff C. "A novel strategy for the purification of recombinantly expressed unstructured protein domains." J Chromatogr B Analyt Technol Biomed Life Sci. 2003; 786(1-2): 247-54. PMID: 12651021
 
Kalthoff C, Alves J, Urbanke C, Knorr R, Ungewickell EJ. "Unusual structural organization of the endocytic proteins AP180 and epsin 1." J Biol Chem. 2002; 277(10): 8209-16. PMID: 11756460
 
Kamada K, Hanaoka F, Burley SK. "Crystal structure of the MazE/MazF complex: molecular bases of antidote-toxin recognition." Mol Cell. 2003; 11(4): 875-84. PMID: 12718874
 
Kanamaru S, Ishiwata Y, Suzuki T, Rossmann MG, Arisaka F. "Control of bacteriophage T4 tail lysozyme activity during the infection process." J Mol Biol. 2005; 346(4): 1013-20. PMID: 15701513
 
Kanamori N, Madsen LH, Radutoiu S, Frantescu M, Quistgaard EM, Miwa H, Downie JA, James EK, Felle HH, Haaning LL, Jensen TH, Sato S, Nakamura Y, Tabata S, Sandal N, Stougaard J. "From The Cover: A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis." Proc Natl Acad Sci U S A. 2006; 103(2): 359-64. PMID: 16407163
 
Kandori K, Uoya Y, Ishikawa T. "Effects of Acetonitrile on Adsorption Behavior of Bovine Serum Albumin onto Synthetic Calcium Hydroxyapatite Particles." J Colloid Interface Sci. 2002; 252(2): 269-75. PMID: 16290789
 
Kane BE, Svensson B, Ferguson DM. "Molecular recognition of opioid receptor ligands." Aaps J. 2006; 8(1): E126-37. PMID: 16584119
 
Kaneda S, Nalbantoglu J, Takeishi K, Shimizu K, Gotoh O, Seno T, Ayusawa D. "Structural and functional analysis of the human thymidylate synthase gene." J Biol Chem. 1990; 265(33): 20277-84. PMID: 2243092
 
Kaneko K, Hachiya NS. "The alternative role of 14-3-3 zeta as a sweeper of misfolded proteins in disease conditions." Med Hypotheses. 2006; 67(1): 169-71. PMID: 16516399
 
Kanesaka S, Kamiguchi K, Kanekiyo M, Kuroki S, Ando I. "Diffusional behavior of poly(beta-benzyl L-aspartate) in the rodlike, random-coil, and intermediate forms as studied by high field-gradient 1H NMR spectroscopy." Biomacromolecules. 2006; 7(4): 1323-8. PMID: 16602756
 
Kang CB, Tai J, Chia J, Yoon HS. "The flexible loop of Bcl-2 is required for molecular interaction with immunosuppressant FK-506 binding protein 38 (FKBP38)." FEBS Lett. 2005; 579(6): 1469-76. PMID: 15733859
 
Kang DS, Kern RC, Puthenveedu MA, von Zastrow M, Williams JC, Benovic JL. "Structure of an arrestin2/clathrin complex reveals a novel clathrin binding domain that modulates receptor trafficking." J Biol Chem. 2009. PMID: 19710023
 
Kang N, Chen D, Wang L, Duan L, Liu SR, Tang L, Liu QF, Cui LX, He W. "Rwdd1, a thymus aging related molecule, is a new member of the intrinsically unstructured protein family." Cell Mol Immunol. 2008; 5(5): 333-9. PMID: 18954556
 
Kang S, Prevelige PE Jr. "Domain study of bacteriophage p22 coat protein and characterization of the capsid lattice transformation by hydrogen/deuterium exchange." J Mol Biol. 2005; 347(5): 935-48. PMID: 15784254 prevelig@uab.edu
 
Kang X, Hu Y, Li Y, Guo X, Jiang X, Lai L, Xia B, Jin C. "Structural, biochemical and dynamic characterizations of the hRPB8 subunit of human RNA polymerases." J Biol Chem. 2006; 281(26): 18216-26. PMID: 16632472
 
Kapłon TM, Rymarczyk G, Nocula-Ługowska M, Jakób M, Kochman M, Lisowski M, Szewczuk Z, Ozyhar A. "Starmaker exhibits properties of an intrinsically disordered protein." Biomacromolecules. 2008; 9(8): 2118-25. PMID: 18636772
 
Karanicolas J, Brooks CL 3rd. "Integrating folding kinetics and protein function: biphasic kinetics and dual binding specificity in a WW domain." Proc Natl Acad Sci U S A. 2004; 101(10): 3432-7. PMID: 14981252
 
Karbstein K, Herschlag D. "Extraordinarily slow binding of guanosine to the Tetrahymena group I ribozyme: implications for RNA preorganization and function." Proc Natl Acad Sci U S A. 2003; 100(5): 2300-5. PMID: 12591943
 
Karlin D, Ferron F, Canard B, Longhi S. "Structural disorder and modular organization in Paramyxovirinae N and P." 2003; 84(Pt 12): 3239-52. PMID: 14645906 sonia.longhi@afmb.univ-mrs.fr
 
Karlin D, Longhi S, Canard B. "Substitution of two residues in the measles virus nucleoprotein results in an impaired self-association." Virology. 2002; 302(2): 420-432. PMID: 12441086
 
Karlin D, Longhi S, Receveur V, Canard B. "The N-terminal domain of the phosphoprotein of Morbilliviruses belongs to the natively unfolded class of proteins." Virology. 2002; 296(2): 251-62. PMID: 12069524
 
Karlsson L, van Eijk MC, Soderman O. "Compaction of DNA by gemini surfactants: effects of surfactant architecture." J Colloid Interface Sci. 2002; 252(2): 290-6. PMID: 16290792
 
Kartasova T, van de Putte P. "Isolation, characterization, and UV-stimulated expression of two families of genes encoding polypeptides of related structure in human epidermal keratinocytes." Mol Cell Biol. 1988; 8(5): 2195-2203. PMID: 3133554
 
Kasai N, Tsunaka Y, Ohki I, Hirose S, Morikawa K, Tate S. "Solution structure of the HMG-box domain in the SSRP1 subunit of FACT." J. Biomol. NMR. 2005; 32(1): 83-8. PMID: 16041486
 
Kashima I, Yamashita A, Izumi N, Kataoka N, Morishita R, Hoshino S, Ohno M, Dreyfuss G, Ohno S. "Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay." Genes Dev. 2006; 20(3): 355-67. PMID: 16452507
 
Kasus-Jacobi A, Perdereau D, Auzan C, Clauser E, Van Obberghen E, Mauvais-Jarvis F, Girard J, Burnol AF. "Identification of the rat adapter Grb14 as an inhibitor of insulin actions." J Biol Chem. 1998; 273(40): 26026-35. PMID: 9748281
 
Katahira M, Miyanoiri Y, Enokizono Y, Matsuda G, Nagata T, Ishikawa F, Uesugi S. "Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA." J Mol Biol. 2001; 311(5): 973-88. PMID: 11531333
 
Kaupmann K, Huggel K, Heid J, Flor PJ, Bischoff S, Mickel SJ, McMaster G, Angst C, Bittiger H, Froestl W, Bettler B. "Expression cloning of GABA(B) receptors uncovers similarity to metabotropic glutamate receptors." Nature. 1997; 386(6622): 239-46. PMID: 9069281
 
Kauppi B, Nielsen BB, Ramaswamy S, Larsen IK, Thelander M, Thelander L, Eklund H. "The three-dimensional structure of mammalian ribonucleotide reductase protein R2 reveals a more-accessible iron-radical site than Escherichia coli R2." J Mol Biol. 1996; 262(5): 706-20. PMID: 8876648
 
Kaur J, Libich DS, Campagnoni CW, Wood DD, Moscarello MA, Campagnoni AT, Harauz G. "Expression and properties of the recombinant murine Golli-myelin basic protein isoform J37." J Neurosci Res. 2003; 71(6): 777-84. PMID: 12605403 gharauz@uoguelph.ca
 
Kauserud H, Stensrud O, Decock C, Shalchian-Tabrizi K, Schumacher T. "Multiple gene genealogies and AFLPs suggest cryptic speciation and long-distance dispersal in the basidiomycete Serpula himantioides (Boletales)." Mol Ecol. 2006; 15(2): 421-31. PMID: 16448410
 
Kavalenka A, Urbancic I, Belle V, Rouger S, Costanzo S, Kure S, Fournel A, Longhi S, Guigliarelli B, Strancar J. "Conformational analysis of the partially disordered measles virus N(TAIL)-XD complex by SDSL EPR spectroscopy." Biophys. J.. 2010; 98(6): 1055-64. PMID: 20303863
 
Kawai T, Akira S. "TLR signaling." Cell Death Differ. 2006. PMID: 16410796
 
Kawarabayasi Y, Hino Y, Horikawa H, Yamazaki S, Haikawa Y, Jin-no K, Takahashi M, Sekine M, Baba S, Ankai A, Kosugi H, Hosoyama A, Fukui S, Nagai Y, Nishijima K, Nakazawa H, Takamiya M, Masuda S, Funahashi T, Tanaka T, Kudoh Y, Yamazaki J, Kushida N, Oguchi A, Kikuchi H, et al. "Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1." DNA Res. 1999; 6(2): 83-101, 145-52. PMID: 10382966
 
Kawe M, Pluckthun A. "GroEL Walks the Fine Line: The Subtle Balance of Substrate and Co-chaperonin Binding by GroEL. A Combinatorial Investigation by Design, Selection and Screening." J Mol Biol. 2005. PMID: 16427651
 
Kay M. "Immunoregulation of cellular life span." Ann N Y Acad Sci. 2005; 1057: 85-111. PMID: 16399889
 
Kay MM. "Band 3 and its alterations in health and disease." Cell Mol Biol (Noisy-le-grand). 2004; 50(2): 117-38. PMID: 15095783
 
Keck ZY, Li TK, Xia J, Bartosch B, Cosset FL, Dubuisson J, Foung SK. "Analysis of a highly flexible conformational immunogenic domain a in hepatitis C virus E2." J Virol. 2005; 79(21): 13199-208. PMID: 16227243
 
Keegan N, Wright NG, Lakey JH. "Circular dichroism spectroscopy of folding in a protein monolayer." Angew Chem Int Ed Engl. 2005; 44(30): 4801-4. PMID: 16028206 j.h.lakey@ncl.ac.uk
 
Kehr JC, Zilliges Y, Springer A, Disney MD, Ratner DD, Bouchier C, Seeberger PH, de Marsac NT, Dittmann E. "A mannan binding lectin is involved in cell-cell attachment in a toxic strain of Microcystis aeruginosa." Mol Microbiol. 2006; 59(3): 893-906. PMID: 16420359
 
Keizer DW, Crump MP, Lee TW, Slupsky CM, Clark-Lewis I, Sykes BD. "Human CC chemokine I-309, structural consequences of the additional disulfide bond." Biochemistry. 2000; 39(20): 6053-9. PMID: 10821677
 
Keizer DW, Slupsky CM, Kalisiak M, Campbell AP, Crump MP, Sastry PA, Hazes B, Irvin RT, Sykes BD. "Structure of a pilin monomer from Pseudomonas aeruginosa: implications for the assembly of pili." J Biol Chem. 2001; 276(26): 24186-24193. PMID: 11294863 brian.sykes@ualberta.ca
 
Keller KM, Breeden MM, Zhang J, Ellington AD, Brodbelt JS. "Electrospray ionization of nucleic acid aptamer/small molecule complexes for screening aptamer selectivity." J Mass Spectrom. 2005; 40(10): 1327-37. PMID: 16217837
 
Kellermayer MS, Smith SB, Granzier HL, Bustamante C. "Folding-unfolding transitions in single titin molecules characterized with laser tweezers." Science. 1997; 276(5315): 1112-6. PMID: 9148805
 
Kelly PJ, Stallard N, Todd S. "An adaptive group sequential design for phase II/III clinical trials that select a single treatment from several." J Biopharm Stat. 2005; 15(4): 641-58. PMID: 16022169
 
Kelly SM, Jess TJ, Price NC. "How to study proteins by circular dichroism." Biochim Biophys Acta. 2005; 1751(2): 119-39. PMID: 16027053
 
Kentsis A, Mezei M, Osman R. "Origin of the sequence-dependent polyproline II structure in unfolded peptides." Proteins. 2005; 61(4): 769-76. PMID: 16193481
 
Kerby RL, Hong SS, Ensign SA, Coppoc LJ, Ludden PW, Roberts GP. "Genetic and physiological characterization of the Rhodospirillum rubrum carbon monoxide dehydrogenase system." J Bacteriol. 1992; 174(16): 5284-94. PMID: 1644755
 
Kercher MA, Lu P, Lewis M. "Lac repressor-operator complex." Curr Opin Struct Biol. 1997; 7(1): 76-85. PMID: 9032054
 
Kerman A, Ananthanarayanan VS. "Expression and spectroscopic characterization of a large fragment of the mu-opioid receptor." Biochim Biophys Acta. 2005; 1747(1): 133-40. PMID: 15680247
 
Kern SE, Kinzler KW, Bruskin A, Jarosz D, Friedman P, Prives C, Vogelstein B. "Identification of p53 as a sequence-specific DNA-binding protein." Science. 1991; 252(5013): 1708-11. PMID: 2047879
 
Khanna M, Wu H, Johansson C, Caizergues-Ferrer M, Feigon J. "Structural study of the H/ACA snoRNP components Nop10p and the 3' hairpin of U65 snoRNA." RNA. 2006; 12(1): 40-52. PMID: 16373493
 
Khare SD, Ding F, Gwanmesia KN, Dokholyan NV. "Molecular origin of polyglutamine aggregation in neurodegenerative diseases." PLoS Comput Biol. 2005; 1(3): 230-5. PMID: 16158094
 
Khaymina SS, Kenney JM, Schroeter MM, Chalovich JM. "Fesselin is a natively unfolded protein." J Proteome Res. 2007; 6(9): 3648-54. PMID: 17676886
 
Khoshnoodi J, Sigmundsson K, Cartailler JP, Bondar O, Sundaramoorthy M, Hudson BG. "Mechanism of chain selection in the assembly of collagen IV: a prominent role for the alpha2 chain." J Biol Chem. 2006; 281(9): 6058-69. PMID: 16373348
 
Kienberger F, Ebner A, Gruber HJ, Hinterdorfer P. "Molecular recognition imaging and force spectroscopy of single biomolecules." Acc Chem Res. 2006; 39(1): 29-36. PMID: 16411737
 
Kikuchi S, Hirohashi T, Nakai M. "Characterization of the Preprotein Translocon at the Outer Envelope Membrane of Chloroplasts by Blue Native PAGE." Plant Cell Physiol. 2006. PMID: 16415065
 
Kim AS, Kakalis LT, Abdul-Manan N, Liu GA, Rosen MK. "Autoinhibition and activation mechanisms of the Wiskott-Aldrich syndrome protein." Nature. 2000; 404(6774): 151-8. PMID: 10724160
 
Kim BH, Lee SU. "Enantiomer separation of a novel aminothiazolecarboxamide fungicide using polysaccharide-derived chiral stationary phases." J Chromatogr Sci. 2005; 43(10): 501-4. PMID: 16438788
 
Kim C, Xuong NH, Taylor SS. "Crystal structure of a complex between the catalytic and regulatory (RIalpha) subunits of PKA." Science. 2005; 307(5710): 690-6. PMID: 15692043
 
Kim CY, Park MS, Dyer RB. "Human flap endonuclease-1: conformational change upon binding to the flap DNA substrate and location of the Mg2+ binding site." Biochemistry. 2001; 40(10): 3208-14. PMID: 11258937
 
Kim H, Lee SH, Han JH, Lee JA, Cheang YH, Chang DJ, Lee YS, Kaang BK. "A nucleolar protein ApLLP induces ApC/EBP expression required for long-term synaptic facilitation in aplysia neurons." Neuron. 2006; 49(5): 707-18. PMID: 16504946
 
Kim IW, Collino S, Morse DE, Evans JS. [http://pubs.acs.org/doi/abs/10.1021/cg060056q]. "A Crystal Modulating Protein from Molluscan Nacre That Limits the Growth of Calcite in Vitro." ACS Crystal Growth & Design. 2006; 6(5): 1078-1082.
 
Kim JH, Singvall J, Schwarz-Linek U, Johnson BJ, Potts JR, Hook M. "BBK32, a fibronectin binding MSCRAMM from Borrelia burgdorferi, contains a disordered region that undergoes a conformational change on ligand binding." J Biol Chem. 2004; 279(40): 41706-14. PMID: 15292204
 
Kim JK, Mastronardi FG, Wood DD, Lubman DM, Zand R, Moscarello MA. "Multiple sclerosis: an important role for post-translational modifications of myelin basic protein in pathogenesis." Mol Cell Proteomics. 2003; 2(7): 453-62. PMID: 12832457
 
Kim J, Raman B, Ahn KH. "Artificial receptors that provides a preorganized hydrophobic environment: a biomimetic approach to dopamine recognition in water." J Org Chem. 2006; 71(1): 38-45. PMID: 16388615
 
Kim KK, Kim R, Kim SH. "Crystal structure of a small heat-shock protein." Nature. 1998; 394(6693): 595-9. PMID: 9707123
 
Kim OK, Je J, Jernigan G, Buckley L, Whitten D. "Super-helix formation induced by cyanine J-aggregates onto random-coil carboxymethyl amylose as template." J Am Chem Soc. 2006; 128(2): 510-6. PMID: 16402838
 
Kim R, Kim KK, Yokota H, Kim SH. "Small heat shock protein of Methanococcus jannaschii, a hyperthermophile." Proc Natl Acad Sci U S A. 1998; 95(16): 9129-33. PMID: 9689045
 
Kim TD, Paik SR, Yang CH. "Structural and functional implications of C-terminal regions of alpha-synuclein." Biochemistry. 2002; 41(46): 13782-90. PMID: 12427041
 
Kim TD, Ryu HJ, Cho HI, Yang CH, Kim J. "Thermal behavior of proteins: heat-resistant proteins and their heat-induced secondary structural changes." Biochemistry. 2000; 39(48): 14839-46. PMID: 11101300 jkim63@yumc.yonsei.ac.kr
 
Kim W, George A, Evans M, Conticello VP. "Cotranslational incorporation of a structurally diverse series of proline analogues in an Escherichia coli expression system." Chembiochem. 2004; 5(7): 928-36. PMID: 15239049
 
Kim W, Yamasaki Y, Kataoka K. "Development of a Fitting Model Suitable for the Isothermal Titration Calorimetric Curve of DNA with Cationic Ligands." J Phys Chem B Condens Matter Mater Surf Interfaces Biophys. 2006; 110(22): 10919-10925. PMID: 16771345
 
Kim Y, Prestegard JH. "Refinement of the NMR structures for acyl carrier protein with scalar coupling data." Proteins. 1990; 8(4): 377-85. PMID: 2091027
 
King SM. "The dynein microtubule motor." Biochim Biophys Acta. 2000; 1496(1): 60-75. PMID: 10722877
 
Kinoshita T, Nakanishi I, Terasaka T, Kuno M, Seki N, Warizaya M, Matsumura H, Inoue T, Takano K, Adachi H, Mori Y, Fujii T. "Structural basis of compound recognition by adenosine deaminase." Biochemistry. 2005; 44(31): 10562-9. PMID: 16060665
 
Kiralj R, Ferreira MM. "Molecular graphics approach to bacterial AcrB protein-beta-lactam antibiotic molecular recognition in drug efflux mechanism." J Mol Graph Model. 2006. PMID: 16406715
 
Kisselev OG, Kao J, Ponder JW, Fann YC, Gautam N, Marshall GR. "Light-activated rhodopsin induces structural binding motif in G protein alpha subunit." Proc Natl Acad Sci U S A. 1998; 95(8): 4270-5. PMID: 9539726
 
Kissinger CR, Parge HE, Knighton DR, Lewis CT, Pelletier LA, Tempczyk A, Kalish VJ, Tucker KD, Showalter RE, Moomaw EW, et al. "Crystal structures of human calcineurin and the human FKBP12-FK506-calcineurin complex." Nature. 1995; 378(6557): 641-4. PMID: 8524402
 
Kitahara R, Yamada H, Akasaka K, Wright PE. "High pressure NMR reveals that apomyoglobin is an equilibrium mixture from the native to the unfolded." J Mol Biol. 2002; 320(2): 311-9. PMID: 12079388
 
Kjaergaard M, Nørholm AB, Hendus-Altenburger R, Pedersen SF, Poulsen FM, Kragelund BB. "Temperature-dependent structural changes in intrinsically disordered proteins: Formation of alpha-helices or loss of polyproline II?" 2010. PMID: 20556825
 
Kjaergaard M, Teilum K, Poulsen FM. "Conformational selection in the molten globule state of the nuclear coactivator binding domain of CBP." Proc. Natl. Acad. Sci. U.S.A.. 2010; 107(28): 12535-40. PMID: 20616042
 
Kleerekoper QK, Putkey JA. "PEP-19: An intrinsically disordered regulator of calmodulin signaling." J Biol Chem. 2008. PMID: 19106096
 
Kleffmann T, Russenberger D, von Zychlinski A, Christopher W, Sjölander K, Gruissem W, Baginsky S. "The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions." Curr. Biol.. 2004; 14(5): 354-62. PMID: 15028209
 
Klein FA, Atkinson RA, Potier N, Moras D, Cavarelli J. "Biochemical and NMR mapping of the interface between CREB-binding protein and ligand binding domains of nuclear receptor: beyond the LXXLL motif." J Biol Chem. 2005; 280(7): 5682-92. PMID: 15542861
 
Klein MM, Gittis AG, Su HP, Makobongo MO, Moore JM, Singh S, Miller LH, Garboczi DN. "The cysteine-rich interdomain region from the highly variable plasmodium falciparum erythrocyte membrane protein-1 exhibits a conserved structure." PLoS Pathog.. 2008; 4(9): e1000147. PMID: 18773118
 
Kleinschmidt JA, Dingwall C, Maier G, Franke WW. "Molecular characterization of a karyophilic, histone-binding protein: cDNA cloning, amino acid sequence and expression of nuclear protein N1/N2 of Xenopus laevis." Embo J. 1986; 5(13): 3547-52. PMID: 3549279
 
Kleinschmidt JA, Seiter A. "Identification of domains involved in nuclear uptake and histone binding of protein N1 of Xenopus laevis." Embo J. 1988; 7(6): 1605-1614. PMID: 3168999
 
Klein-Seetharaman J, Oikawa M, Grimshaw SB, Wirmer J, Duchardt E, Ueda T, Imoto T, Smith LJ, Dobson CM, Schwalbe H. "Long-range interactions within a nonnative protein." Science. 2002; 295(5560): 1719-22. PMID: 11872841
 
Klemm JD, Rould MA, Aurora R, Herr W, Pabo CO. "Crystal structure of the Oct-1 POU domain bound to an octamer site: DNA recognition with tethered DNA-binding modules." Cell. 1994; 77(1): 21-32. PMID: 8156594
 
Klevit RE, Herriott JR, Horvath SJ. "Solution structure of a zinc finger domain of yeast ADR1." Proteins. 1990; 7(3): 215-26. PMID: 2114025
 
Klitgaard K, Molbak L, Jensen TK, Lindboe CF, Boye M. "Laser capture microdissection of bacterial cells targeted by fluorescence in situ hybridization." Biotechniques. 2005; 39(6): 864-8. PMID: 16382905
 
Klucinski P, Martirosian G. "[Role of cytokines and pathogen associated molecular pattern receptors in sepsis]." Przegl Epidemiol. 2005; 59(3): 695-701. PMID: 16433311
 
Kmiecik S, Kurcinski M, Rutkowska A, Gront D, Kolinski A. "Denatured proteins and early folding intermediates simulated in a reduced conformational space." Acta Biochim Pol. 2006; 53(1): 131-44. PMID: 16365636
 
Knapp S, Muller S, Digilio G, Bonaldi T, Bianchi ME, Musco G. "The long acidic tail of high mobility group box 1 (HMGB1) protein forms an extended and flexible structure that interacts with specific residues within and between the HMG boxes." Biochemistry. 2004; 43(38): 11992-7. PMID: 15379539
 
Knapp S, Zamai M, Volpi D, Nardese V, Avanzi N, Breton J, Plyte S, Flocco M, Marconi M, Isacchi A, Caiolfa VR. "Thermodynamics of the high-affinity interaction of TCF4 with beta-catenin." J Mol Biol. 2001; 306(5): 1179-1189. PMID: 11237626
 
Knighton DR, Zheng JH, Ten Eyck LF, Xuong NH, Taylor SS, Sowadski JM. "Structure of a peptide inhibitor bound to the catalytic subunit of cyclic adenosine monophosphate-dependent protein kinase." Science. 1991; 253(5018): 414-20. PMID: 1862343
 
Koag MC, Fenton RD, Wilkens S, Close TJ. "The binding of maize DHN1 to lipid vesicles. Gain of structure and lipid specificity." Plant Physiol. 2003; 131(1): 309-16. PMID: 12529538
 
Kobashigawa Y, Sakai M, Naito M, Yokochi M, Kumeta H, Makino Y, Ogura K, Tanaka S, Inagaki F. "Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK." Nat. Struct. Mol. Biol.. 2007; 14(6): 503-10. PMID: 17515907
 
Kobe B, Kampmann T, Forwood JK, Listwan P, Brinkworth RI. "Substrate specificity of protein kinases and computational prediction of substrates." Biochim Biophys Acta. 2005; 1754(1-2): 200-9. PMID: 16172032
 
Kobielak K, Kobielak A, Trzeciak WH. "Cloning of the lymphoid enhancer binding factor-1 (Lef-1) cDNA from rat kidney: homology to the mouse sequence." Acta Biochim Pol. 1999; 46(4): 885-888. PMID: 10824856
 
Koga T. "Multicanonical Monte Carlo simulations on intramolecular micelle formation in copolymers." Eur Phys J E Soft Matter. 2005; 17(3): 381-8. PMID: 16021342
 
Kokai E, Tantos A, Vissi E, Szoor B, Tompa P, Gausz J, Alphey L, Friedrich P, Dombradi V. "CG15031/PPYR1 is an intrinsically unstructured protein that interacts with protein phosphatase Y." Arch Biochem Biophys. 2006. PMID: 16631104
 
Kokocinski F, Delhomme N, Wrobel G, Hummerich L, Toedt G, Lichter P. "FACT--a framework for the functional interpretation of high-throughput experiments." BMC Bioinformatics. 2005; 6: 161. PMID: 15985174
 
Kondo J, Urzhumtsev A, Westhof E. "Two conformational states in the crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A site." Nucleic Acids Res. 2006; 34(2): 676-85. PMID: 16452297
 
Kong C, Ito K, Walsh MA, Wada M, Liu Y, Kumar S, Barford D, Nakamura Y, Song H. "Crystal structure and functional analysis of the eukaryotic class II release factor eRF3 from S. pombe." Mol Cell. 2004; 14(2): 233-45. PMID: 15099522
 
Kongsted J, Pedersen TB, Jensen L, Hansen AE, Mikkelsen KV. "Coupled cluster and density functional theory studies of the vibrational contribution to the optical rotation of (S)-propylene oxide." J Am Chem Soc. 2006; 128(3): 976-82. PMID: 16417389
 
Konig P, Giraldo R, Chapman L, Rhodes D. "The crystal structure of the DNA-binding domain of yeast RAP1 in complex with telomeric DNA." Cell. 1996; 85(1): 125-36. PMID: 8620531
 
Konig R, Zhou W. "Signal transduction in T helper cells: CD4 coreceptors exert complex regulatory effects on T cell activation and function." Curr Issues Mol Biol. 2004; 6(1): 1-15. PMID: 14632255
 
Konrat R, Krautler B, Weiskirchen R, Bister K. "Structure of cysteine- and glycine-rich protein CRP2. Backbone dynamics reveal motional freedom and independent spatial orientation of the lim domains." J Biol Chem. 1998; 273(36): 23233-40. PMID: 9722554
 
Kopp J, Schwede T. "Automated protein structure homology modeling: a progress report." Pharmacogenomics. 2004; 5(4): 405-16. PMID: 15165176
 
Korndorfer IP, Fessner WD, Matthews BW. "The structure of rhamnose isomerase from Escherichia coli and its relation with xylose isomerase illustrates a change between inter and intra-subunit complementation during evolution." J Mol Biol. 2000; 300(4): 917-33. PMID: 10891278
 
Kostrewa D, Granzin J, Stock D, Choe HW, Labahn J, Saenger W. "Crystal structure of the factor for inversion stimulation FIS at 2.0 A resolution." J Mol Biol. 1992; 226(1): 209-26. PMID: 1619650
 
Kostyukova AS, Hitchcock-Degregori SE, Greenfield NJ. "Molecular basis of tropomyosin binding to tropomodulin, an actin-capping protein." J Mol Biol. 2007; 372(3): 608-18. PMID: 17706248
 
Kostyukova AS, Tiktopulo EI, Maeda Y. "Folding properties of functional domains of tropomodulin." Biophys J. 2001; 81(1): 345-51. PMID: 11423419 kostyuas@umdnj.edu
 
Ko TP, Chen YK, Robinson H, Tsai PC, Gao YG, Chen AP, Wang AH, Liang PH. "Mechanism of product chain length determination and the role of a flexible loop in Escherichia coli undecaprenyl-pyrophosphate synthase catalysis." J Biol Chem. 2001; 276(50): 47474-82. PMID: 11581264
 
Ko TP, Ng JD, McPherson A. "The three-dimensional structure of canavalin from jack bean (Canavalia ensiformis)." Plant Physiol. 1993; 101(3): 729-44. PMID: 8310056
 
Kovacs D, Kalmar E, Torok Z, Tompa P. "Chaperone Activity of ERD10 and ERD14, Two Disordered Stress-Related Plant Proteins." Plant Physiol. : 381-390. PMID: 18359842
 
Kovacs L, Csanadi A, Kiss E, Miczak A. "Rv0802c acetyltransferase from Mycobacterium tuberculosis H37Rv." Acta Microbiol Immunol Hung. 2005; 52(3-4): 363-71. PMID: 16400876
 
Kozlov AG, Cox MM, Lohman TM. "Regulation of single-stranded DNA binding by the C termini of Escherichia coli single-stranded DNA-binding (SSB) protein." J. Biol. Chem.. 2010; 285(22): 17246-52. PMID: 20360609
 
Kozlov G, Cheng J, Ziomek E, Banville D, Gehring K, Ekiel I. "Structural insights into molecular function of the metastasis-associated phosphatase PRL-3." J Biol Chem. 2004; 279(12): 11882-9. PMID: 14704153
 
Kraich M, Klein M, Patino E, Harrer H, Nickel J, Sebald W, Mueller TD. "A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor." BMC Biol. 2006; 4(1): 13. PMID: 16640778
 
Krasnow MA, Saffman EE, Kornfeld K, Hogness DS. "Transcriptional activation and repression by Ultrabithorax proteins in cultured Drosophila cells." Cell. 1989; 57(6): 1031-43. PMID: 2567632
 
Kraulis PJ, Domaille PJ, Campbell-Burk SL, Van Aken T, Laue ED. "Solution structure and dynamics of ras p21.GDP determined by heteronuclear three- and four-dimensional NMR spectroscopy." Biochemistry. 1994; 33(12): 3515-3531. PMID: 8142349
 
Krebs D, Dahmani B, el Antri S, Monnot M, Convert O, Mauffret O, Troalen F, Fermandjian S. "The basic subdomain of the c-Jun oncoprotein. A joint CD, Fourier-transform infrared and NMR study." Eur J Biochem. 1995; 231(2): 370-380. PMID: 7635148
 
Krimm I, Ostlund C, Gilquin B, Couprie J, Hossenlopp P, Mornon JP, Bonne G, Courvalin JC, Worman HJ, Zinn-Justin S. "The Ig-like structure of the C-terminal domain of lamin A/C, mutated in muscular dystrophies, cardiomyopathy, and partial lipodystrophy." Structure. 2002; 10(6): 811-23. PMID: 12057196
 
Kriplani U, Kay BK. "Selecting peptides for use in nanoscale materials using phage-displayed combinatorial peptide libraries." Curr Opin Biotechnol. 2005; 16(4): 470-5. PMID: 16019201
 
Krishnamurthy VM, Quinton LJ, Estroff LA, Metallo SJ, Isaacs JM, Mizgerd JP, Whitesides GM. "Promotion of opsonization by antibodies and phagocytosis of Gram-positive bacteria by a bifunctional polyacrylamide." Biomaterials. 2006; 27(19): 3663-74. PMID: 16527349
 
Krissansen GW, Owen MJ, Verbi W, Crumpton MJ. "Primary structure of the T3 gamma subunit of the T3/T cell antigen receptor complex deduced from cDNA sequences: evolution of the T3 gamma and delta subunits." Embo J. 1986; 5(8): 1799-808. PMID: 2944745
 
Kristensen O, Guenat S, Dar I, Allaman-Pillet N, Abderrahmani A, Ferdaoussi M, Roduit R, Maurer F, Beckmann JS, Kastrup JS, Gajhede M, Bonny C. "A unique set of SH3-SH3 interactions controls IB1 homodimerization." Embo J. 2006. PMID: 16456539
 
Kriwacki RW, Hengst L, Tennant L, Reed SI, Wright PE. "Structural studies of p21Waf1/Cip1/Sdi1 in the free and Cdk2-bound state: conformational disorder mediates binding diversity." Proc Natl Acad Sci U S A. 1996; 93(21): 11504-9. PMID: 8876165
 
Kriwacki RW, Wu J, Tennant L, Wright PE, Siuzdak G. "Probing protein structure using biochemical and biophysical methods. Proteolysis, matrix-assisted laser desorption/ionization mass spectrometry, high-performance liquid chromatography and size-exclusion chromatography of p21Waf1/Cip1/Sdi1." J Chromatogr A. 1997; 777(1): 23-30. PMID: 9297835
 
Kruijer W, Van Schaik FM, Sussenbach JS. "Nucleotide sequence of the gene encoding adenovirus type 2 DNA binding protein." Nucleic Acids Res. 1982; 10(15): 4493-500. PMID: 6985485
 
Krust A, Green S, Argos P, Kumar V, Walter P, Bornert JM, Chambon P. "The chicken oestrogen receptor sequence: homology with v-erbA and the human oestrogen and glucocorticoid receptors." Embo J. 1986; 5(5): 891-7. PMID: 3755102
 
Kueltzo LA, Middaugh CR. "Potential use of non-classical pathways for the transport of macromolecular drugs." Expert Opin Investig Drugs. 2000; 9(9): 2039-50. PMID: 11060791
 
Kueltzo LA, Osiecki J, Barker J, Picking WL, Ersoy B, Picking WD, Middaugh CR. "Structure-function analysis of invasion plasmid antigen C (IpaC) from Shigella flexneri." J Biol Chem. 2003; 278(5): 2792-8. PMID: 12427760
 
Kukhtina V, Kottwitz D, Strauss H, Heise B, Chebotareva N, Tsetlin V, Hucho F. "Intracellular domain of nicotinic acetylcholine receptor: the importance of being unfolded." J Neurochem. 1997; 104(4): 63-7. PMID: 16635251
 
Kukreja R, Singh B. "Biologically active novel conformational state of botulinum, the most poisonous poison." J Biol Chem. 2005; 280(47): 39346-52. PMID: 16179354
 
Kumar A, Srivastava S, Mishra RK, Mittal R, Hosur RV. "Local structural preferences and dynamics restrictions in the urea-denatured state of SUMO-1: NMR characterization." Biophys J. 2006; 90(7): 2498-509. PMID: 16415059
 
Kumar P, Verma A, Maiti S, Gargallo R, Chowdhury S. "Tetraplex DNA transitions within the human c-myc promoter detected by multivariate curve resolution of fluorescence resonance energy transfer." Biochemistry. 2005; 44(50): 16426-34. PMID: 16342935
 
Kumar R, Betney R, Li J, Thompson EB, McEwan IJ. "Induced alpha-helix structure in AF1 of the androgen receptor upon binding transcription factor TFIIF." Biochemistry. 2004; 43(11): 3008-13. PMID: 15023052
 
Kumar R, Thompson EB. "Gene regulation by the glucocorticoid receptor: structure:function relationship." J Steroid Biochem Mol Biol. 2005; 94(5): 383-94. PMID: 15876404 bthompso@utmb.edu
 
Kumar R, Thompson EB. "Transactivation functions of the N-terminal domains of nuclear hormone receptors: protein folding and coactivator interactions." Mol Endocrinol. 2003; 17(1): 1-10. PMID: 12511601 bthompso@utmb.edu
 
Kumar R, Volk DE, Li J, Lee JC, Gorenstein DG, Thompson EB. "TATA box binding protein induces structure in the recombinant glucocorticoid receptor AF1 domain." Proc Natl Acad Sci U S A. 2004; 101(47): 16425-30. PMID: 15545613 bthompso@utmb.edu
 
Kumar S, Nussinov R. "Close-range electrostatic interactions in proteins." Chembiochem. 2002; 3(7): 604-17. PMID: 12324994
 
Kumar S, Yin X, Trapp BD, Hoh JH, Paulaitis ME. "Relating interactions between neurofilaments to the structure of axonal neurofilament distributions through polymer brush models." Biophys J. 2002; 82(5): 2360-72. PMID: 11964226
 
Kundrotas PJ, Karshikoff A. "Charge sequence coding in statistical modeling of unfolded proteins." Biochim Biophys Acta. 2004; 1702(1): 1-8. PMID: 15450845
 
Kurotani A, Takagi T, Toyama M, Shirouzu M, Yokoyama S, Fukami Y, Tokmakov AA. "Comprehensive bioinformatics analysis of cell-free protein synthesis: identification of multiple protein properties that correlate with successful expression." FASEB J. 2009. PMID: 19940260
 
Kussie PH, Gorina S, Marechal V, Elenbaas B, Moreau J, Levine AJ, Pavletich NP. "Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain." Science. 1996; 274(5289): 948-53. PMID: 8875929
 
Kuster H, Thompson H, Kinet JP. "Characterization and expression of the gene for the human Fc receptor gamma subunit. Definition of a new gene family." J Biol Chem. 1990; 265(11): 6448-52. PMID: 2138619
 
Kuszewski J, Gronenborn AM, Clore GM. "Improving the packing and accuracy of NMR structures with a pseudopotential for the radius of gyration." J Am Chem Soc. 1999; 121(10): 2337-8.
 
Kuszewski J, Gronenborn AM, Clore GM. "Improving the packing and accuracy of NMR structures with a pseudopotential for the radius of gyration." Journal of the American Chemical Society. 1999; 121(10): 2337-2338.
 
Kuzin A, Semesi A, Skarina T, Savchenko A, Arrowsmith C, Tong L. "X-ray structure of yiba_ecoli northeast structural genomics consortium target et31." To be published. .
 
Kuznetsov IB, Rackovsky S. "On the properties and sequence context of structurally ambivalent fragments in proteins." Protein Sci. 2003; 12(11): 2420-33. PMID: 14573856 shelly@camelot.mssm.edu
 
Kuzuhara A. "Analysis of structural changes in bleached keratin fibers (black and white human hair) using Raman spectroscopy." Biopolymers. 2006; 81(6): 506-14. PMID: 16425172
 
Kuzuhara A. "Protein structural changes in keratin fibers induced by chemical modification using 2-iminothiolane hydrochloride: a Raman spectroscopic investigation." Biopolymers. 2005; 79(4): 173-84. PMID: 16145652
 
Kwon HJ. "Discovery of new small molecules and targets towards angiogenesis via chemical genomics approach." Curr Drug Targets. 2006; 7(4): 397-405. PMID: 16611028
 
Kwon K, Streaker ED, Ruparelia S, Beckett D. "Multiple disordered loops function in corepressor-induced dimerization of the biotin repressor." J Mol Biol. 2000; 304(5): 821-33. PMID: 11124029
 
 
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