Bibliography |
This bibliography includes all the papers referenced by DisProt, papers that have cited several key references on disordered proteins, and additional papers found by key word searches. The list is sorted by the first author's last name. Click here to see the distribution per year of the papers in the bibliography.
Last update on June 23rd, 2006. Total number of papers in this bibliography: 2785.
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Labeit S, Kolmerer B. "Titins: giant proteins in charge of muscle ultrastructure and elasticity." Science. 1995; 270(5234): 293-6. PMID: 7569978 labeit@embl-heidelberg.de |
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Labourier E, Rossi F, Gallouzi IE, Allemand E, Divita G, Tazi J. "Interaction between the N-terminal domain of human DNA topoisomerase I and the arginine-serine domain of its substrate determines phosphorylation of SF2/ASF splicing factor." Nucleic Acids Res. 1998; 26(12): 2955-2962. PMID: 9611241 |
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Lacy ER, Filippov I, Lewis WS, Otieno S, Xiao L, Weiss S, Hengst L, Kriwacki RW. "p27 binds cyclin-CDK complexes through a sequential mechanism involving binding-induced protein folding." Nat Struct Mol Biol. 2004; 11(4): 358-64. PMID: 15024385 |
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Lacy ER, Wang Y, Post J, Nourse A, Webb W, Mapelli M, Musacchio A, Siuzdak G, Kriwacki RW. "Molecular basis for the specificity of p27 toward cyclin-dependent kinases that regulate cell division." J Mol Biol. 2005; 349(4): 764-73. PMID: 15890360 |
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Ladame S, Schouten JA, Roldan J, Redman JE, Neidle S, Balasubramanian S. "Exploring the recognition of quadruplex DNA by an engineered cys(2)-his(2) zinc finger protein." Biochemistry. 2006; 45(5): 1393-9. PMID: 16445281 |
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Ladaviere, L., Deleage, G., Montserret, R., Dalbon, P., Jolivet, M., Penin, F. "Structural Analysis of the Immunodominant Antigenic Region of the Hepatitis C Virus Capsid Protein by NMR." unpublished. . |
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Ladu MJ, Stine WB Jr, Narita M, Getz GS, Reardon CA, Bu G. "Self-Assembly of HEK Cell-Secreted ApoE Particles Resembles ApoE Enrichment of Lipoproteins as a Ligand for the LDL Receptor-Related Protein." Biochemistry. 2006; 45(2): 381-390. PMID: 16401069 |
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Laederach A, Reilly PJ. "Modeling protein recognition of carbohydrates." Proteins. 2005; 60(4): 591-7. PMID: 16001416 |
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Lagona J, Wagner BD, Isaacs L. "Molecular-recognition properties of a water-soluble cucurbit[6]uril analogue." J Org Chem. 2006; 71(3): 1181-90. PMID: 16438536 |
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Laguri C, Sadir R, Rueda P, Baleux F, Gans P, Arenzana-Seisdedos F, Lortat-Jacob H. "The novel CXCL12gamma isoform encodes an unstructured cationic domain which regulates bioactivity and interaction with both glycosaminoglycans and CXCR4." PLoS One. 2007; 2(10): e1110. PMID: 17971873 |
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Lah J, Simic M, Vesnaver G, Marianovsky I, Glaser G, Engelberg-Kulka H, Loris R. "Energetics of structural transitions of the addiction antitoxin MazE: is a programmed bacterial cell death dependent on the intrinsically flexible nature of the antitoxins?" J Biol Chem. 2005; 280(17): 17397-407. PMID: 15735309 |
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Laine D, Bourhis JM, Longhi S, Flacher M, Cassard L, Canard B, Sautès-Fridman C, Rabourdin-Combe C, Valentin H. "Measles virus nucleoprotein induces cell-proliferation arrest and apoptosis through NTAIL-NR and NCORE-FcgammaRIIB1 interactions, respectively." J. Gen. Virol.. 2005; 86(Pt 6): 1771-84. PMID: 15914856 |
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Laine D, Trescol-Biemont MC, Longhi S, Libeau G, Marie JC, Vidalain PO, Azocar O, Diallo A, Canard B, Rabourdin-Combe C, Valentin H. "Measles virus (MV) nucleoprotein binds to a novel cell surface receptor distinct from FcgammaRII via its C-terminal domain: role in MV-induced immunosuppression." J Virol. 2003; 77(21): 11332-11346. PMID: 14557619 |
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Lai YS, Chiue LF, Hsu T. "Low-molecular-weight vitellogenin 1-like proteins are components of a UV-damaged-DNA binding activity highly expressed in zebrafish (Danio rerio) embryos." J Exp Zoolog A Comp Exp Biol. 2006; 305(3): 215-24. PMID: 16432884 |
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Lakshminarayanan R, Fan D, Du C, Moradian-Oldak J. "The role of secondary structure in the entropically driven amelogenin self-assembly." Biophys J. 2007; 93(10): 3664-74. PMID: 17704165 |
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Laky K, Fleischacker C, Fowlkes BJ. "TCR and Notch signaling in CD4 and CD8 T-cell development." Immunol Rev. 2006; 209: 274-83. PMID: 16448548 |
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Lambert SJ, Nicholson JM, Chantalat L, Reid AJ, Donovan MJ, Baldwin JP. "Purification of histone core octamers and 2.15 A X-ray analysis of crystals in KCl/phosphate." Acta Crystallogr D Biol Crystallogr. 1999; 55(5): 1048-1051. PMID: 10216302 |
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Lamour V, Hogan BP, Erie DA, Darst SA. "Crystal structure of Thermus aquaticus Gfh1, a Gre-factor paralog that inhibits rather than stimulates transcript cleavage." J Mol Biol. 2006; 356(1): 179-88. PMID: 16337964 |
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Lancaster CA, Taylor-Harris PM, Self AJ, Brill S, van Erp HE, Hall A. "Characterization of rhoGAP. A GTPase-activating protein for rho-related small GTPases." J Biol Chem. 1994; 269(2): 1137-42. PMID: 8288572 |
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Landon C, Meudal H, Boulanger N, Bulet P, Vovelle F. "Solution structures of stomoxyn and spinigerin, two insect antimicrobial peptides with an alpha-helical conformation." Biopolymers. 2006; 81(2): 92-103. PMID: 16170803 |
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Landon C, Thouzeau C, Labbe H, Bulet P, Vovelle F. "Solution structure of spheniscin, a beta-defensin from the penguin stomach." J Biol Chem. 2004; 279(29): 30433-30439. PMID: 15123713 |
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Landry SJ, Taher A, Georgopoulos C, van der Vies SM. "Interplay of structure and disorder in cochaperonin mobile loops." Proc Natl Acad Sci U S A. 1996; 93(21): 11622-7. PMID: 8876186 |
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Landsberg MJ, Moran-Jones K, Smith R. "Molecular recognition of an RNA trafficking element by heterogeneous nuclear ribonucleoprotein A2." Biochemistry. 2006; 45(12): 3943-51. PMID: 16548521 |
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Lang R, Kocourek A, Braun M, Tschesche H, Huber R, Bode W, Maskos K. "Substrate specificity determinants of human macrophage elastase (MMP-12) based on the 1.1 A crystal structure." J Mol Biol. 2001; 312(4): 731-42. PMID: 11575928 |
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Lanzotti DJ, Kupsco JM, Yang XC, Dominski Z, Marzluff WF, Duronio RJ. "Drosophila stem-loop binding protein intracellular localization is mediated by phosphorylation and is required for cell cycle-regulated histone mRNA expression." Mol Biol Cell. 2004; 15(3): 1112-23. PMID: 14999087 |
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Laporte L, Stultz J, Thomas GJ Jr. "Solution conformations and interactions of alpha and beta subunits of the Oxytricha nova telomere binding protein: investigation by Raman spectroscopy." Biochemistry. 1997; 36(26): 8053-8059. PMID: 9201953 |
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Lapouge K, Smith SJ, Walker PA, Gamblin SJ, Smerdon SJ, Rittinger K. "Structure of the TPR domain of p67phox in complex with Rac.GTP." Mol Cell. 2000; 6(4): 899-907. PMID: 11090627 |
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Lapthorn AJ, Harris DC, Littlejohn A, Lustbader JW, Canfield RE, Machin KJ, Morgan FJ, Isaacs NW. "Crystal structure of human chorionic gonadotropin." Nature. 1994; 369(6480): 455-61. PMID: 8202136 |
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Larsen L, Ropke C. "Suppressors of cytokine signalling: SOCS." APMIS. 2002; 110(12): 833-44. PMID: 12645661 |
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Larson HN, Weiner H, Hurley TD. "Disruption of the coenzyme binding site and dimer interface revealed in the crystal structure of mitochondrial aldehyde dehydrogenase "Asian" variant." J Biol Chem. 2005; 280(34): 30550-6. PMID: 15983043 |
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Larsson G, Martinez G, Schleucher J, Wijmenga SS. "Detection of nano-second internal motion and determination of overall tumbling times independent of the time scale of internal motion in proteins from NMR relaxation data." J Biomol NMR. 2003; 27(4): 291-312. PMID: 14512728 |
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LaRue JN, Speck JC Jr. "Turkey egg white lysozyme. Preparation of the crystalline enzyme and investigation of the amino acid sequence." J Biol Chem. 1970; 245(8): 1985-91. PMID: 5440837 |
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Lasker MV, Kuruvilla SM, Gajjar MM, Kapoor A, Nair SK. "Metal Ion-Mediated Reduction in Surface Entropy Improves Diffraction Quality of Crystals of the IRAK-4 Death Domain." J Biomol Tech. 2006; 17(2): 114-21. PMID: 16741238 |
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Laurberg M, Kristensen O, Martemyanov K, Gudkov AT, Nagaev I, Hughes D, Liljas A. "Structure of a mutant EF-G reveals domain III and possibly the fusidic acid binding site." J Mol Biol. 2000; 303(4): 593-603. PMID: 11054294 |
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Laurence JS, Hallenga K, Stauffacher CV. "1H, 15N, 13C resonance assignments of the human protein tyrosine phosphatase PRL-1." J Biomol NMR. 2004; 29(3): 417-8. PMID: 15213447 |
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Lavignac N, Brain KR, Allender CJ. "Concentration dependent atrazine-atrazine complex formation promotes selectivity in atrazine imprinted polymers." Biosens Bioelectron. 2006. PMID: 16690310 |
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Lawn RM, Adelman J, Bock SC, Franke AE, Houck CM, Najarian RC, Seeburg PH, Wion KL. "The sequence of human serum albumin cDNA and its expression in E. coli." Nucleic Acids Res. 1981; 9(22): 6103-114. PMID: 6171778 |
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Lazo ND, Downing DT. "A mixture of alpha-helical and 3(10)-helical conformations for involucrin in the human epidermal corneocyte envelope provides a scaffold for the attachment of both lipids and proteins." J Biol Chem. 1999; 274(52): 37340-4. PMID: 10601302 |
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Lebbink JH, Georgijevic D, Natrajan G, Fish A, Winterwerp HH, Sixma TK, de Wind N. "Dual role of MutS glutamate 38 in DNA mismatch discrimination and in the authorization of repair." Embo J. 2006; 25(2): 409-19. PMID: 16407973 |
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Lecomte JT, Kao YH, Cocco MJ. "The native state of apomyoglobin described by proton NMR spectroscopy: the A-B-G-H interface of wild-type sperm whale apomyoglobin." Proteins. 1996; 25(3): 267-85. PMID: 8844864 |
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Lee BC, Pandit A, Croonquist PA, Hoff WD. "Folding and signaling share the same pathway in a photoreceptor." Proc Natl Acad Sci U S A. 2001; 98(16): 9062-7. PMID: 11470891 |
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Lee BM, Xu J, Clarkson BK, Martinez-Yamout MA, Dyson HJ, Case DA, Gottesfeld JM, Wright PE. "SInduced Fit and "Lock and Key" Recognition of 5S RNA by Zinc Fingers of Transcription Factor IIIA." J Mol Biol. 2005. PMID: 16405997 |
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Lee DG, Hahm KS, Park Y, Kim HY, Lee W, Lim SC, Seo YK, Choi CH. "Functional and structural characteristics of anticancer peptide Pep27 analogues." Cancer Cell Int. 2005; 5: 21. PMID: 16004618 |
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Lee EN, Lee SY, Lee D, Kim J, Paik SR. "Lipid interaction of alpha-synuclein during the metal-catalyzed oxidation in the presence of Cu2+ and H2O2." J Neurochem. 2003; 84(5): 1128-42. PMID: 12603836 |
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Lee HJ, Lai YH, Wu SY, Chen YH. "The effect of N-terminal truncation on double-dimer assembly of goose delta-crystallin." Biochem J. 2005; 392(Pt 3): 545-54. PMID: 16101585 |
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Lee JC, Lai BT, Kozak JJ, Gray HB, Winkler JR. "Alpha-synuclein tertiary contact dynamics." J Phys Chem B. 2007; 111(8): 2107-12. PMID: 17279794 |
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Lee JH, Canny MD, De Erkenez A, Krilleke D, Ng YS, Shima DT, Pardi A, Jucker F. "A therapeutic aptamer inhibits angiogenesis by specifically targeting the heparin binding domain of VEGF165." Proc Natl Acad Sci U S A. 2005; 102(52): 18902-7. PMID: 16357200 |
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Lee, J.Y. and W. Yang. "UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke." Cell. 2006; 127(7): 13491360. PMID: 17190599 |
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Lee KA, Fuda H, Lee YC, Negishi M, Strott CA, Pedersen LC. "Crystal structure of human cholesterol sulfotransferase (SULT2B1b) in the presence of pregnenolone and 3'-phosphoadenosine 5'-phosphate. Rationale for specificity differences between prototypical SULT2A1 and the SULT2BG1 isoforms." J Biol Chem. 2003; 278(45): 44593-9. PMID: 12923182 |
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Lee KJ, Jovanovic M, Udayakumar D, Bladen CL, Dynan WS. "Identification of DNA-PKcs phosphorylation sites in XRCC4 and effects of mutations at these sites on DNA end joining in a cell-free system." DNA Repair (Amst). 2004; 3(3): 267-76. PMID: 15177042 |
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Lee L, Stollar E, Chang J, Grossmann JG, O'Brien R, Ladbury J, Carpenter B, Roberts S, Luisi B. "Expression of the Oct-1 transcription factor and characterization of its interactions with the Bob1 coactivator." Biochemistry. 2001; 40(22): 6580-8. PMID: 11380252 |
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Lee MS, Kliewer SA, Provencal J, Wright PE, Evans RM. "Structure of the retinoid X receptor alpha DNA binding domain: a helix required for homodimeric DNA binding." Science. 1993; 260(5111): 1117-21. PMID: 8388124 |
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Lee S, Ayrapetov MK, Kemble DJ, Parang K, Sun G. "Docking-based substrate recognition by the catalytic domain of a protein tyrosine kinase, CSK." J Biol Chem. 2006. PMID: 16439366 |
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Lee S, Perez-Luna VH. "Dextran-gold nanoparticle hybrid material for biomolecule immobilization and detection." Anal Chem. 2005; 77(22): 7204-11. PMID: 16285667 |
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Lee S, Warner K, Inglett GE. "Rheological properties and baking performance of new oat beta-glucan-rich hydrocolloids." J Agric Food Chem. 2005; 53(25): 9805-9. PMID: 16332135 |
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Leitner A, Lindner W. "Functional probing of arginine residues in proteins using mass spectrometry and an arginine-specific covalent tagging concept." Anal Chem. 2005; 77(14): 4481-8. PMID: 16013863 |
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Lekka M, Kulik AJ, Jeney S, Raczkowska J, Lekki J, Budkowski A, Forro L. "Friction force microscopy as an alternative method to probe molecular interactions." J Chem Phys. 2005; 123(1): 014702. PMID: 16035858 |
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Lendel C, Dogan J, Hard T. "Structural Basis for Molecular Recognition in an Affibody:Affibody Complex." J Mol Biol. 2006. PMID: 16750222 |
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Lesmeister MJ, Jorgenson RL, Young SL, Misfeldt ML. "17Beta-estradiol suppresses TLR3-induced cytokine and chemokine production in endometrial epithelial cells." Reprod Biol Endocrinol. 2005; 3: 74. PMID: 16384532 |
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Letts JA, Persson M, Schuman B, Borisova SN, Palcic MM, Evans SV. "The effect of heavy atoms on the conformation of the active-site polypeptide loop in human ABO(H) blood-group glycosyltransferase B." Acta Crystallogr D Biol Crystallogr. 2007; 63(Pt 8): 860-5. PMID: 17642512 |
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Leulliot N, Varani G. "Current topics in RNA-protein recognition: control of specificity and biological function through induced fit and conformational capture." Biochemistry. 2001; 40(27): 7947-56. PMID: 11434763 varani@chem.washington.edu |
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Levy Y, Onuchic JN. "Water mediation in protein folding and molecular recognition." Annu Rev Biophys Biomol Struct. 2006; 35: 389-415. PMID: 16689642 |
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Liang L, Yao P, Jiang M. "Structural transformation of apocytochrome c induced by alternating copolymers of maleic acid and alkene." Biomacromolecules. 2005; 6(5): 2748-55. PMID: 16153115 |
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Liao S, Shang Q, Zhang X, Zhang J, Xu C, Tu X.
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Liao YC, Jiang YC, Wang SL. "Discrete water hexamers and template-assisted molecular recognition in an elastic zincophosphate lattice." J Am Chem Soc. 2005; 127(37): 12794-5. PMID: 16159261 |
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Liepinsh E, Banyai L, Pintacuda G, Trexler M, Patthy L, Otting G. "NMR structure of the netrin-like domain (NTR) of human type I procollagen C-proteinase enhancer defines structural consensus of NTR domains and assesses potential proteinase inhibitory activity and ligand binding." J Biol Chem. 2003; 278(28): 25982-9. PMID: 12670942 |
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Li HT, Chang T, Chang WC, Chen CJ, Liu MY, Gui LL, Zhang JP, An XM, Chang WR. "Crystal structure of C-terminal desundecapeptide nitrite reductase from Achromobacter cycloclastes." Biochem Biophys Res Commun. 2005; 338(4): 1935-42. PMID: 16293231 |
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Li M, Hazelbauer GL. "Adaptational assistance in clusters of bacterial chemoreceptors." Mol Microbiol. 2005; 56(6): 1617-26. PMID: 15916610 |
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Lim J, Winkler WC, Nakamura S, Scott V, Breaker RR. "Molecular-recognition characteristics of SAM-binding riboswitches." Angew Chem Int Ed Engl. 2006; 45(6): 964-8. PMID: 16381055 |
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Lim RY, Huang NP, Koser J, Deng J, Lau KH, Schwarz-Herion K, Fahrenkrog B, Aebi U. "Flexible phenylalanine-glycine nucleoporins as entropic barriers to nucleocytoplasmic transport." Proc Natl Acad Sci U S A. 2006. PMID: 16769882 |
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Li M, Shi J, Wei Z, Teng FY, Tang BL, Song J. "Structural characterization of the human Nogo-A functional domains. Solution structure of Nogo-40, a Nogo-66 receptor antagonist enhancing injured spinal cord regeneration." Eur J Biochem. 2004; 271(17): 3512-22. PMID: 15317586 |
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Li MS, Hu CK, Klimov DK, Thirumalai D. "Multiple stepwise refolding of immunoglobulin domain I27 upon force quench depends on initial conditions." Proc Natl Acad Sci U S A. 2006; 103(1): 93-8. PMID: 16373511 |
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Li M, Song J. "The N- and C-termini of the human Nogo molecules are intrinsically unstructured: bioinformatics, CD, NMR characterization, and functional implications." Proteins. 2007; 68(1): 100-8. PMID: 17397058 |
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Li M, Song J. "Nogo-B receptor possesses an intrinsically unstructured ectodomain and a partially folded cytoplasmic domain." Biochem Biophys Res Commun. 2007; 360(1): 128-34. PMID: 17585875 |
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Lindgren PE, McGavin MJ, Signas C, Guss B, Gurusiddappa S, Hook M, Lindberg M. "Two different genes coding for fibronectin-binding proteins from Streptococcus dysgalactiae. The complete nucleotide sequences and characterization of the binding domains." Eur J Biochem. 1993; 214(3): 819-27. PMID: 8319691 |
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Linding R, Russell RB, Neduva V, Gibson TJ. "GlobPlot: Exploring protein sequences for globularity and disorder." Nucleic Acids Res. 2003; 31(13): 3701-8. PMID: 12824398 |
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Linding R, Schymkowitz J, Rousseau F, Diella F, Serrano L. "A comparative study of the relationship between protein structure and beta-aggregation in globular and intrinsically disordered proteins." J Mol Biol. 2004; 342(1): 345-53. PMID: 15313629 |
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Lindner RA, Carver JA, Ehrnsperger M, Buchner J, Esposito G, Behlke J, Lutsch G, Kotlyarov A, Gaestel M. "Mouse Hsp25, a small shock protein. The role of its C-terminal extension in oligomerization and chaperone action." Eur J Biochem. 2000; 267(7): 1923-32. PMID: 10727931 |
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