This bibliography includes all the papers referenced by DisProt, papers that have cited several key references on disordered proteins, and additional papers found by key word searches. The list is sorted by the first author's last name. Click here to see the distribution per year of the papers in the bibliography.
Last update on June 23rd, 2006. Total number of papers in this bibliography: 2785.

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Naeem A, Fatima S, Khan RH. "Characterization of partially folded intermediates of papain in presence of cationic, anion and non-ionic detergents at low pH." Biopolymers. 2006. PMID: 16598711
Nagourney RA. "Ex vivo programmed cell death and the prediction of response to chemotherapy." Curr Treat Options Oncol. 2006; 7(2): 103-10. PMID: 16455021
Naik MT, Suree N, Ilangovan U, Liew CK, Thieu W, Campbell DO, Clemens JJ, Jung ME, Clubb RT. "Staphylococcus aureus Sortase A transpeptidase. Calcium promotes sorting signal binding by altering the mobility and structure of an active site loop." J Biol Chem. 2006; 281(3): 1817-26. PMID: 16269411
Nakagawa A, Nakashima T, Taniguchi M, Hosaka H, Kimura M, Tanaka I. "The three-dimensional structure of the RNA-binding domain of ribosomal protein L2; a protein at the peptidyl transferase center of the ribosome." Embo J. 1999; 18(6): 1459-1467. PMID: 10075918
Nakaji-Hirabayashi T, Endo H, Kawasaki H, Gemmei-Ide M, Kitano H. "Inclusion of bisphenols by a self-assembled monolayer of thiolated calix[6]arene on a gold surface." Environ Sci Technol. 2005; 39(14): 5414-20. PMID: 16082974
Nakamoto T. "A unified view of the initiation of protein synthesis." Biochem Biophys Res Commun. 2006; 341(3): 675-8. PMID: 16438936
Nakamura T, Hinagata J, Tanaka T, Imanishi T, Wada Y, Kodama T, Doi T. "HSP90, HSP70, and GAPDH directly interact with the cytoplasmic domain of macrophage scavenger receptors." Biochem Biophys Res Commun. 2002; 290(2): 858-64. PMID: 11785981
Nakanishi M, Robetorye RS, Adami GR, Pereira-Smith OM, Smith JR. "Identification of the active region of the DNA synthesis inhibitory gene p21Sdi1/CIP1/WAF1." Embo J. 1995; 14(3): 555-63. PMID: 7859744
Nakano M, Kasai K, Yoshida K, Tanimoto T, Tamaki Y, Tobita T. "Conformation of the fowl protamine, galline, and its binding properties to DNA." J Biochem (Tokyo). 1989; 105(1): 133-7. PMID: 2738040
Nakashima T, Kimura M, Nakagawa A, Tanaka I. "Crystallization and preliminary X-ray crystallographic study of a 23S rRNA binding domain of the ribosomal protein L2 from Bacillus stearothermophilus." J Struct Biol. 1998; 124(1): 99-101. PMID: 9931278
Nakayama J, Rice JC, Strahl BD, Allis CD, Grewal SI. "Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly." Science. 2001; 292(5514): 110-113. PMID: 11283354
Nakayama T, Fujiwara T, Miyazawa A, Asakawa S, Shimizu N, Shimizu Y, Mikoshiba K, Akagawa K. "Mapping of the human HPC-1/syntaxin 1A gene (STX1A) to chromosome 7 band q11.2." Genomics. 1997; 42(1): 173-176. PMID: 9177791
Nanasi PP, Jednakovits A. "Multilateral in vivo and in vitro protective effects of the novel heat shock protein coinducer, bimoclomol: results of preclinical studies." Cardiovasc Drug Rev. 2001; 19(2): 133-51. PMID: 11484067
Nanda V, DeGrado WF. "Computational design of heterochiral peptides against a helical target." J Am Chem Soc. 2006; 128(3): 809-16. PMID: 16417370
Nandi T, Dash D, Ghai R, BRao C, Kannan K, Brahmachari SK, Ramakrishnan C, Ramachandran S. "A novel complexity measure for comparative analysis of protein sequences from complete genomes." J Biomol Struct Dyn. 2003; 20(5): 657-68. PMID: 12643768
Nanduri V, Sorokulova IB, Samoylov AM, Simonian AL, Petrenko VA, Vodyanoy V. "Phage as a molecular recognition element in biosensors immobilized by physical adsorption." Biosens Bioelectron. 2006. PMID: 16730970
Nanga RP, Brender JR, Vivekanandan S, Popovych N, Ramamoorthy A. "NMR structure in a membrane environment reveals putative amyloidogenic regions of the SEVI precursor peptide PAP(248-286)." J Am Chem Soc. 2009; 131(49): 17972-9. PMID: 19995078
Napper CE, Drickamer K, Taylor ME. "Collagen binding by the mannose receptor mediated through the fibronectin type II domain." Biochem J. 2006. PMID: 16441238
Narayanaswamy R, Ellington AD. "Engineering RNA-based circuits." Handb Exp Pharmacol. 2006: 423-45. PMID: 16594629
Nardini M, Svergun D, Konarev PV, Spano S, Fasano M, Bracco C, Pesce A, Donadini A, Cericola C, Secundo F, Luini A, Corda D, Bolognesi M. "The C-terminal domain of the transcriptional corepressor CtBP is intrinsically unstructured." Protein Sci. 2006; 15(5): 1042-50. PMID: 16597837
Nash HA. "Topological nuts and bolts." Science. 1998; 279(5356): 1490-1491. PMID: 9508726
Nash P, Tang X, Orlicky S, Chen Q, Gertler FB, Mendenhall MD, Sicheri F, Pawson T, Tyers M. "Multisite phosphorylation of a CDK inhibitor sets a threshold for the onset of DNA replication." Nature. 2001; 414(6863): 514-21. PMID: 11734834
Nassar N, Horn G, Herrmann C, Block C, Janknecht R, Wittinghofer A. "Ras/Rap effector specificity determined by charge reversal." Nat Struct Biol. 1996; 3(8): 723-729. PMID: 8756332
Nassar N, Horn G, Herrmann C, Scherer A, McCormick F, Wittinghofer A. "The 2.2 A crystal structure of the Ras-binding domain of the serine/threonine kinase c-Raf1 in complex with Rap1A and a GTP analogue." Nature. 1995; 375(6532): 554-560. PMID: 7791872
Natarajan K, Sawicki MW, Margulies DH, Mariuzza RA. "Crystal structure of human CD69: a C-type lectin-like activation marker of hematopoietic cells." Biochemistry. 2000; 39(48): 14779-86. PMID: 11101293
Naud JF, McDuff FO, Sauve S, Montagne M, Webb BA, Smith SP, Chabot B, Lavigne P. "Structural and Thermodynamical Characterization of the Complete p21 Gene Product of Max." Biochemistry. 2005; 44(38): 12746-12758. PMID: 16171389
Ndao M, Keene E, Amos FF, Rewari G, Ponce CB, Estroff L, Evans JS. "Intrinsically disordered mollusk shell prismatic protein that modulates calcium carbonate crystal growth." Biomacromolecules. 2010; 11(10): 2539-44. PMID: 20831150
Neira JL. "The capsid protein of human immunodeficiency virus: molecular recognition and design of antiviral agents." FEBS J.. 2009; 276(21): 6097. PMID: 19825043
Neira JL. "The positively charged C-terminal region of the inactivating Shaker B peptide binds to the potassium channel KcsA." Protein Eng. Des. Sel.. 2009; 22(6): 341-7. PMID: 19329803
Neira JL. "Biophysical and structural studies on the capsid protein of the human immunodeficiency virus type 1: a new drug target?" ScientificWorldJournal. 2009; 9: 404-19. PMID: 19484162
Neira JL, Fersht AR. "Acquisition of native-like interactions in C-terminal fragments of barnase." J. Mol. Biol.. 1999; 287(2): 421-32. PMID: 10080903
Neira JL, Fersht AR. "Exploring the folding funnel of a polypeptide chain by biophysical studies on protein fragments." J. Mol. Biol.. 1999; 285(3): 1309-33. PMID: 9887278
Neira JL, Fersht AR. "An NMR study on the beta-hairpin region of barnase." Fold Des. 1996; 1(3): 231-41. PMID: 9079384
Neira JL, Gómez J. "The conformational stability of the Streptomyces coelicolor histidine-phosphocarrier protein. Characterization of cold denaturation and urea-protein interactions." Eur. J. Biochem.. 2004; 271(11): 2165-81. PMID: 15153107
Neira JL, González C, Toiron C, de Prat-Gay G, Rico M. "Three-dimensional solution structure and stability of thioredoxin m from spinach." Biochemistry. 2001; 40(50): 15246-56. PMID: 11735407
Neira JL, Itzhaki LS, Ladurner AG, Davis B, de Prat Gay G, Fersht AR. "Following co-operative formation of secondary and tertiary structure in a single protein module." J. Mol. Biol.. 1997; 268(1): 185-97. PMID: 9149151
Neira JL, Itzhaki LS, Otzen DE, Davis B, Fersht AR. "Hydrogen exchange in chymotrypsin inhibitor 2 probed by mutagenesis." J. Mol. Biol.. 1997; 270(1): 99-110. PMID: 9231904
Neira JL, Mateu MG. "Hydrogen exchange of the tetramerization domain of the human tumour suppressor p53 probed by denaturants and temperature." Eur. J. Biochem.. 2001; 268(18): 4868-77. PMID: 11559355
Neira JL, Rico M. "Folding studies on ribonuclease A, a model protein." Fold Des. 1997; 2(1): R1-11. PMID: 9080194
Neira JL, Román-Trufero M, Contreras LM, Prieto J, Singh G, Barrera FN, Renart ML, Vidal M. "The transcriptional repressor RYBP is a natively unfolded protein which folds upon binding to DNA." Biochemistry. 2009; 48(6): 1348-60. PMID: 19170609
Neira JL, Sevilla P, Menéndez M, Bruix M, Rico M. "Hydrogen exchange in ribonuclease A and ribonuclease S: evidence for residual structure in the unfolded state under native conditions." J. Mol. Biol.. 1999; 285(2): 627-43. PMID: 9878434
Neira JL, Vázquez E, Fersht AR. "Stability and folding of the protein complexes of barnase." Eur. J. Biochem.. 2000; 267(10): 2859-70. PMID: 10806383
Nelson WD, Blakely SE, Nesmelov YE, Thomas DD. "Site-directed spin labeling reveals a conformational switch in the phosphorylation domain of smooth muscle myosin." Proc Natl Acad Sci U S A. 2005; 102(11): 4000-5. PMID: 15753305
Neri M, Anselmi C, Cascella M, Maritan A, Carloni P. "Coarse-grained model of proteins incorporating atomistic detail of the active site." Phys Rev Lett. 2005; 95(21): 218102. PMID: 16384187
Nett JH, Hunte C, Trumpower BL. "Changes to the length of the flexible linker region of the Rieske protein impair the interaction of ubiquinol with the cytochrome bc1 complex." Eur J Biochem. 2000; 267(18): 5777-82. PMID: 10971589
Neuberger G, Schneider G, Eisenhaber F. "pkaPS: prediction of protein kinase A phosphorylation sites with the simplified kinase-substrate binding model." Biol Direct. 2007; 2: 1. PMID: 17222345
Neuweiler H, Doose S, Sauer M. "A microscopic view of miniprotein folding: enhanced folding efficiency through formation of an intermediate." Proc Natl Acad Sci U S A. 2005; 102(46): 16650-5. PMID: 16269542
Newton CH, Shimmin LC, Yee J, Dennis PP. "A family of genes encode the multiple forms of the Saccharomyces cerevisiae ribosomal proteins equivalent to the Escherichia coli L12 protein and a single form of the L10-equivalent ribosomal protein." J Bacteriol. 1990; 172(2): 579-588. PMID: 2404943
Neyroz P, Zambelli B, Ciurli S. "Intrinsically disordered structure of Bacillus pasteurii UreG as revealed by steady-state and time-resolved fluorescence spectroscopy." Biochemistry. 2006; 45(29): 8918-30. PMID: 16846235
Ng JD, Ko TP, McPherson A. "Cloning, expression, and crystallization of jack bean (Canavalia ensiformis) canavalin." Plant Physiol. 1993; 101(3): 713-28. PMID: 8310055
Ng KP, Potikyan G, Savene RO, Denny CT, Uversky VN, Lee KA. "Multiple aromatic side chains within a disordered structure are critical for transcription and transforming activity of EWS family oncoproteins." Proc Natl Acad Sci U S A. 2007; 104(2): 479-84. PMID: 17202261
Nguyen BD, Abbott KL, Potempa K, Kobor MS, Archambault J, Greenblatt J, Legault P, Omichinski JG. "NMR structure of a complex containing the TFIIF subunit RAP74 and the RNA polymerase II carboxyl-terminal domain phosphatase FCP1." Proc Natl Acad Sci U S A. 2003; 100(10): 5688-93. PMID: 12732728
Nguyen HD, Hall CK. "Spontaneous fibril formation by polyalanines; discontinuous molecular dynamics simulations." J Am Chem Soc. 2006; 128(6): 1890-901. PMID: 16464090
Nguyen PH, Stock G, Mittag E, Hu CK, Li MS. "Free energy landscape and folding mechanism of a beta-hairpin in explicit water: a replica exchange molecular dynamics study." Proteins. 2005; 61(4): 795-808. PMID: 16240446
Nicastro G, Menon RP, Masino L, Knowles PP, McDonald NQ, Pastore A. "The solution structure of the Josephin domain of ataxin-3: structural determinants for molecular recognition." Proc Natl Acad Sci U S A. 2005; 102(30): 10493-8. PMID: 16020535
Nicely NI, Kosak J, de Serrano V, Mattos C. "Crystal structures of Ral-GppNHp and Ral-GDP reveal two binding sites that are also present in Ras and Rap." Structure. 2004; 12(11): 2025-36. PMID: 15530367
Nicolas O Laliberté JF. "The complete nucleotide sequence of turnip mosaic potyvirus RNA." The Journal of General Virology. 1992; 73(Pt. 11): 2785-93.
Nicolas O, Laliberté JF. "The complete nucleotide sequence of turnip mosaic potyvirus RNA." J Gen Virol. 1992; 73(11): 2785-93. PMID: 1431807
Nicolet Y, Piras C, Legrand P, Hatchikian CE, Fontecilla-Camps JC. "Desulfovibrio desulfuricans iron hydrogenase: the structure shows unusual coordination to an active site Fe binuclear center." Structure Fold Des. 1999; 7(1): 13-23. PMID: 10368269
Nicoll AJ, Weston CJ, Cureton C, Ludwig C, Dancea F, Spencer N, Smart OS, Gunther UL, Allemann RK. "De novo design of a stable N-terminal helical foldamer." Org Biomol Chem. 2005; 3(24): 4310-5. PMID: 16327890
Nielbo S, Thomsen JK, Graversen JH, Jensen PH, Etzerodt M, Poulsen FM, Thogersen HC. "Structure of the plasminogen kringle 4 binding calcium-free form of the C-type lectin-like domain of tetranectin." Biochemistry. 2004; 43(27): 8636-8643. PMID: 15236571
Nielsen BB, Kauppi B, Thelander M, Thelander L, Larsen IK, Eklund H. "Crystallization and crystallographic investigations of the small subunit of mouse ribonucleotide reductase." FEBS Lett. 1995; 373(3): 310-2. PMID: 7589490
Nielsen, M. S. Vorum, H. Lindersson, E. Jensen, P. H. "Ca2+ binding to alpha-synuclein regulates ligand binding and oligomerization." J Biol Chem. 2001; 276(25): 22680-22684. PMID: 11312271
Nilsson N, Malmborg AC, Borrebaeck CA. "The phage infection process: a functional role for the distal linker region of bacteriophage protein 3." J Virol. 2000; 74(9): 4229-35. PMID: 10756036
Nimmo GA, Cohen P. "The regulation of glycogen metabolism. Purification and characterisation of protein phosphatase inhibitor-1 from rabbit skeletal muscle." Eur J Biochem. 1978; 87(2): 341-51. PMID: 208844
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Nishio K, Morimoto Y, Ishizuka M, Ogasahara K, Tsukihara T, Yutani K. "Conformational changes in the alpha-subunit coupled to binding of the beta 2-subunit of tryptophan synthase from Escherichia coli: crystal structure of the tryptophan synthase alpha-subunit alone." Biochemistry. 2005; 44(4): 1184-92. PMID: 15667212
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