Bibliography |
This bibliography includes all the papers referenced by DisProt, papers that have cited several key references on disordered proteins, and additional papers found by key word searches. The list is sorted by the first author's last name. Click here to see the distribution per year of the papers in the bibliography.
Last update on June 23rd, 2006. Total number of papers in this bibliography: 2785.
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| P | Paci E, Greene LH, Jones RM, Smith LJ. "Characterization of the molten globule state of retinol-binding protein using a molecular dynamics simulation approach." Febs J. 2005; 272(18): 4826-38. PMID: 16156801 | |
Padmanabhan S, Elias-Arnanz M, Carpio E, Aparicio P, Murillo FJ. "Domain architecture of a high mobility group A-type bacterial transcriptional factor." J Biol Chem. 2001; 276(45): 41566-75. PMID: 11533063 | |
Pagliaro M, Ciriminna R, Wong Chi Man M, Campestrini S. "Better chemistry through ceramics: the physical bases of the outstanding chemistry of ORMOSIL." J Phys Chem B Condens Matter Mater Surf Interfaces Biophys. 2006; 110(5): 1976-88. PMID: 16471772 | |
Pahel G, Aulabaugh A, Short SA, Barnes JA, Painter GR, Ray P, Phelps WC. "Structural and functional characterization of the HPV16 E7 protein expressed in bacteria." J Biol Chem. 1993; 268(34): 26018-25. PMID: 8245034 | |
Palczewski K, Kumasaka T, Hori T, Behnke CA, Motoshima H, Fox BA, Le Trong I, Teller DC, Okada T, Stenkamp RE, Yamamoto M, Miyano M. "Crystal structure of rhodopsin: A G protein-coupled receptor." Science. 2000; 289(5480): 739-45. PMID: 10926528 | |
Paleos CM, Tsiourvas D. "Interaction between complementary liposomes: a process leading to multicompartment systems formation." J Mol Recognit. 2006; 19(1): 60-7. PMID: 16312020 | |
Pande V, Ramos MJ. "Molecular recognition of 15-deoxy-delta(12,14)-prostaglandin J2 by nuclear factor-kappa B and other cellular proteins." Bioorg Med Chem Lett. 2005; 15(18): 4057-63. PMID: 16006125 | |
Pandey N, Ganapathi M, Kumar K, Dasgupta D, Das Sutar SK, Dash D. "Comparative analysis of protein unfoldedness in human housekeeping and non-housekeeping proteins." Bioinformatics. 2004; 20(17): 2904-10. PMID: 15238363 | |
Pandey N, Mittal U, Srivastava AK, Mukerji M. "SMARCA2 and THAP11: potential candidates for polyglutamine disorders as evidenced from polymorphism and protein-folding simulation studies." J Hum Genet. 2004; 49(11): 596-602. PMID: 15368101 | |
Pang SS, Duggleby RG, Guddat LW. "Crystal structure of yeast acetohydroxyacid synthase: a target for herbicidal inhibitors." J Mol Biol. 2002; 317(2): 249-62. PMID: 11902841 | |
Pantano S, Marcello A, Ferrari A, Gaudiosi D, Sabo A, Pellegrini V, Beltram F, Giacca M, Carloni P. "Insights on HIV-1 Tat:P/CAF bromodomain molecular recognition from in vivo experiments and molecular dynamics simulations." Proteins. 2006; 62(4): 1062-73. PMID: 16362936 | |
Pantazatos D, Kim JS, Klock HE, Stevens RC, Wilson IA, Lesley SA, Woods VL Jr. "Rapid refinement of crystallographic protein construct definition employing enhanced hydrogen/deuterium exchange MS." Proc Natl Acad Sci U S A. 2004; 101(3): 751-6. PMID: 14715906 vwoods@ucsd.edu | |
Panton LJ, McPhie P, Maloy WL, Wellems TE, Taylor DW, Howard RJ. "Purification and partial characterization of an unusual protein of Plasmodium falciparum: histidine-rich protein II." Mol Biochem Parasitol. 1989; 35(2): 149-160. PMID: 2671720 | |
Pantos A, Tsiourvas D, Nounesis G, Paleos CM. "Interaction of functional dendrimers with multilamellar liposomes: design of a model system for studying drug delivery." Langmuir. 2005; 21(16): 7483-90. PMID: 16042483 | |
Pantos A, Tsiourvas D, Paleos CM, Nounesis G. "Enhanced drug transport from unilamellar to multilamellar liposomes induced by molecular recognition of their lipid membranes." Langmuir. 2005; 21(15): 6696-702. PMID: 16008376 | |
Pan YC, Silverberg AB, Harris SE, Li SS. "Complete amino acid sequence of a major secretory protein from rat seminal vesicle." Int J Pept Protein Res. 1980; 16: 143-146. PMID: 7007263 | |
Papadopoulos E, Oglecka K, Maler L, Jarvet J, Wright PE, Dyson HJ, Graslund A. "NMR Solution Structure of the Peptide Fragment 1-30, Derived from Unprocessed Mouse Doppel Protein, in DHPC Micelles." Biochemistry. 2006; 45(1): 159-166. PMID: 16388591 | |
Papoian GA, Ulander J, Wolynes PG. "Role of water mediated interactions in protein-protein recognition landscapes." J Am Chem Soc. 2003; 125(30): 9170-8. PMID: 15369374 gpapoian@ucsd.edu | |
Papoian GA, Wolynes PG. "The physics and bioinformatics of binding and folding-an energy landscape perspective." Biopolymers. 2003; 68(3): 333-49. PMID: 12601793 | |
Paris C, Lecomte S, Coupry C. "ATR-FTIR spectroscopy as a way to identify natural protein-based materials, tortoiseshell and horn, from their protein-based imitation, galalith." Spectrochim Acta A Mol Biomol Spectrosc. 2005; 62(1-3): 532-8. PMID: 16257757 | |
Parkhill J, Dougan G, James KD, Thomson NR, Pickard D, Wain J, Churcher C, Mungall KL, Bentley SD, Holden MT, Sebaihia M, Baker S, Basham D, Brooks K, Chillingworth T, Connerton P, Cronin A, Davis P, Davies RM, Dowd L, White N, Farrar J, Feltwell T, Hamlin N, Haque A, Hien TT, Holroyd S, Jagels K, Krogh A, Larsen TS, Leather S, Moule S, O'Gaora P, Parry C, Quail M, Rutherford K, Simmonds M, Skelton J, Stevens K, Whitehead S, Barrell BG. "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18." Nature. 2001; 413(6858): 848-52. PMID: 11677608 jobby@ccmb.res.in | |
Park IK, Roach P, Bondor J, Fox SP, DePaoli-Roach AA. "Molecular mechanism of the synergistic phosphorylation of phosphatase inhibitor-2. Cloning, expression, and site-directed mutagenesis of inhibitor-2." J Biol Chem. 1994; 269(2): 944-54. PMID: 8288648 | |
Park JW, Je BR, Piao S, Inamura S, Fujimoto Y, Fukase K, Kusumoto S, Ha NC, Soderhall K, Ha NC, Lee BL. "A synthetic peptidoglycan fragment as a competitive inhibitor of the melanization cascade." J Biol Chem. 2006. PMID: 16421099 | |
Park MS. "Expression of human RAD52 confers resistance to ionizing radiation in mammalian cells." J Biol Chem. 1995; 270(26): 15467-70. PMID: 7797537 | |
Parks CL, Lerch RA, Walpita P, Wang HP, Sidhu MS, Udem SA. "Comparison of predicted amino acid sequences of measles virus strains in the Edmonston vaccine lineage." J Virol. 2001; 75(2): 910-20. PMID: 11134304 | |
Park SJ, Lee SK, Lee BJ. "Effect of tandem rare codon substitution and vector-host combinations on the expression of the EBV gp110 C-terminal domain in Escherichia coli." Protein Expr Purif. 2002; 24(3): 470-80. PMID: 11922764 | |
Park SJ, Seo MD, Lee SK, Ikeda M, Longnecker R, Lee BJ. "Expression and characterization of N-terminal domain of Epstein-Barr virus latent membrane protein 2A in Escherichia coli." Protein Expr Purif. 2005; 41(1): 9-17. PMID: 15802216 | |
Park SM, Jung HY, Chung KC, Rhim H, Park JH, Kim J. "Stress-induced aggregation profiles of GST-alpha-synuclein fusion proteins: role of the C-terminal acidic tail of alpha-synuclein in protein thermosolubility and stability." Biochemistry. 2002; 41(12): 4137-46. PMID: 11900557 jkim63@yumc.yonsei.ac.kr | |
Parraga G, Horvath SJ, Eisen A, Taylor WE, Hood L, Young ET, Klevit RE. "Zinc-dependent structure of a single-finger domain of yeast ADR1." Science. 1988; 241(4872): 1489-92. PMID: 3047872 | |
Partch CL, Clarkson MW, Ozgur S, Lee AL, Sancar A. "Role of structural plasticity in signal transduction by the cryptochrome blue-light photoreceptor." Biochemistry. 2005; 44(10): 3795-805. PMID: 15751956 | |
Partch CL, Sancar A. "Photochemistry and photobiology of cryptochrome blue-light photopigments: the search for a photocycle." Photochem Photobiol. 2005; 81(6): 1291-304. PMID: 16164372 | |
Parthasarathy S, Murthy MR. "Protein thermal stability: insights from atomic displacement parameters (B values)." Protein Eng. 2000; 13(1): 9-13. PMID: 10679524 | |
Pascal C, Bigey F, Ratomahenina R, Boze H, Moulin G, Sarni-Manchado P. "Overexpression and characterization of two human salivary proline rich proteins." Protein Expr Purif. 2006; 47(2): 524-532. PMID: 16529944 | |
Pasta SY, Raman B, Ramakrishna T, Rao ChM. "Role of the C-terminal extensions of alpha-crystallins. Swapping the C-terminal extension of alpha-crystallin to alphaB-crystallin results in enhanced chaperone activity." J Biol Chem. 2002; 277(48): 45821-8. PMID: 12235146 | |
Patenaude SI, Seto NO, Borisova SN, Szpacenko A, Marcus SL, Palcic MM, Evans SV. "The structural basis for specificity in human ABO(H) blood group biosynthesis." Nat Struct Biol. 2002; 9(9): 685-90. PMID: 12198488 | |
Patti JM, Boles JO, Hook M. "Identification and biochemical characterization of the ligand binding domain of the collagen adhesin from Staphylococcus aureus." Biochemistry. 1993; 32(42): 11428-35. PMID: 8218209 | |
Paunola E, Mattila PK, Lappalainen P. "WH2 domain: a small, versatile adapter for actin monomers." FEBS Letters. ; 513(1): 92-7. PMID: 11911886 | |
Pavlov NA, Cherny DI, Heim G, Jovin TM, Subramaniam V. "Amyloid fibrils from the mammalian protein prothymosin alpha." FEBS Lett. 2002; 517(1-3): 37-40. PMID: 12062405 | |
Pawlowski K, Rychlewski L, Zhang B, Godzik A. "Fold predictions for bacterial genomes." J Struct Biol. 2001; 134(2-3): 219-31. PMID: 11551181 | |
Pawson T, Linding R. "Synthetic modular systems--reverse engineering of signal transduction." FEBS Lett. 2005; 579(8): 1808-14. PMID: 15763556 | |
Paz A, Zeev-Ben-Mordehai T, Lundqvist M, Sherman E, Mylonas E, Weiner L, Haran G, Svergun D, Mulder F, Sussman J, Silman I. "Biophysical characterization of the unstructured cytoplasmic domain of the human neuronal adhesion protein neuroligin 3." Biophys J. 2008; 95(4): 1928-44. PMID: 18456828 | |
Peacock RS, Weljie AM, Howard SP, Price FD, and Vogel HJ. "The Solution Structure of the C-terminal Domain of TonB and Interaction Studies with TonB Box Peptides." J Mol Biol. 2005; 345(5): 1185-97. PMID: 15644214 | |
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Peat TS, Frank EG, McDonald JP, Levine AS, Woodgate R, Hendrickson WA. "Structure of the UmuD' protein and its regulation in response to DNA damage." Nature. 1996; 380(6576): 727-30. PMID: 8614470 | |
Pedersen LC, Dong J, Taniguchi F, Kitagawa H, Krahn JM, Pedersen LG, Sugahara K, Negishi M. "Crystal structure of an alpha 1,4-N-acetylhexosaminyltransferase (EXTL2), a member of the exostosin gene family involved in heparan sulfate biosynthesis." J Biol Chem. 2003; 278(16): 14420-8. PMID: 12562774 | |
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Peneff C, Ferrari P, Charrier V, Taburet Y, Monnier C, Zamboni V, Winter J, Harnois M, Fassy F, Bourne Y. "Crystal structures of two human pyrophosphorylase isoforms in complexes with UDPGlc(Gal)NAc: role of the alternatively spliced insert in the enzyme oligomeric assembly and active site architecture." Embo J. 2001; 20(22): 6191-202. PMID: 11707391 | |
Penin F, Brass V, Appel N, Ramboarina S, Montserret R, Ficheux D, Blum HE, Bartenschlager R, Moradpour D. "Structure and function of the membrane anchor domain of hepatitis C virus nonstructural protein 5A." J. Biol. Chem.. 2004; 279(39): 40835-43. PMID: 15247283 | |
Penkett CJ, Dobson CM, Smith LJ, Bright JR, Pickford AR, Campbell ID, Potts JR. "Identification of residues involved in the interaction of Staphylococcus aureus fibronectin-binding protein with the (4)F1(5)F1 module pair of human fibronectin using heteronuclear NMR spectroscopy." Biochemistry. 2000; 39(11): 2887-93. PMID: 10715108 | |
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