Annotations for this protein have been verified by the authors of the corresponding papers



DP00131: TropomodulinFASTA viewXML view

General information
DisProt:DP00131
Name:Tropomodulin
Synonym(s):Q91006_CHICK
Tropomodulin 1
TMOD1
First appeared in release:Release 3.0 (02/17/2006)
UniProt:Q91006
UniGene:Gga.2614
SwissProt: Q91006_CHICK
TrEMBL:  
NCBI (GI): 75570324
Source organism:Gallus gallus (Chicken)
Sequence length:359
Percent disordered:26%
Homologues: 


Native sequence

        10         20         30         40         50         60
         |          |          |          |          |          |
MSYRKELEKY RDLDEDKILG ALTEEELRKL ENELEELDPD NALLPAGLRQ RDQTQKPPTG - 60
PFKREELMAH LEQQAKDIKD REDLVPFTGE KRGKAWIPKQ KPMDPVLESV TLEPELEEAL - 120
ANASDAELCD IAAILGMHTL MSNQQYYEAL GSSTIVNKEG LNSVIKPTKY KPVPDEEPNS - 180
TDVEETLKRI QNNDPDLEEV NLNNIMNIPV PTLKALAEAL KTNTYVKKFS IVGTRSNDPV - 240
AFALAEMLKV NNTLKSLNVE SNFISGSGIL ALVEALQSNT SLIELRIDNQ SQPLGNNVEM - 300
EIANMLEKNT TLLKFGYHFT QQGPRLRASN AMMNNNDLVR KRRLAELNGP IFPKCRTGV



Functional narrative    

Tropomodulin is a 40-kDa protein that stabilizes the actin-tropomyosin filament by capping the slow-growing end (P-end). The molecule was originally found as a tropomyosin-binding protein within the spectrin network that lines the erythrocyte membrane and was later also identified as the P-end capping protein of muscle thin filaments. Now four isoforms have been identified in a variety of mammalian cell types. Tropomodulin inhibits the polymerization and depolymerization of actin monomers at the P-end. This capping is not static and fixed, but dynamic, allowing an exchange of actin monomers with a definite lifetime. Tropomodulin could play important roles in defining actin filament lengths especially in the skeletal muscle sarcomere. This hypothesis is supported by the recent finding that tropomodulin interacts with the N-terminal segments of nebulin, which could be a molecular ruler, but it remains to be proved. Tropomodulin is a bifunctional molecule; the N-terminal half accommodates the interacting site for the N-terminal region of tropomyosin, whereas the C-terminal half is essential for its capping activity, presumably because it contains the actin-binding site. The nebulin interaction site has not been mapped on tropomodulin.

Region 1: 1-92

Map of ordered and disordered regions







Note: 'Mouse' over a region to see the start and stop residues. Click on a region to see detailed information.


Region 1
Type:Disordered
Name:N-terminal capping domain
Location:1 - 92
Length:92
Region sequence:

MSYRKELEKYRDLDEDKILGALTEEELRKLENELEELDPDNALLPAGLRQRDQTQKPPTG
PFKREELMAHLEQQAKDIKDREDLVPFTGEKR

Modification type: Fragment
PDB:  
Structural/functional type: Function arises via a disorder to order transition
Functional classes: Molecular assembly
Functional subclasses: Protein-protein binding
Detection methods:
  1. Circular dichroism (CD) spectroscopy, far-UV (pH: 6.5; 100 mM NaCl, 10 mM sodium phosphate; 5 to 20 microM peptide)

  2. Nuclear magnetic resonance (NMR) (283 K; pH: 6.5; 0.8 mM 13C15N labeled peptide; 100 mM NaCl, 10 mM sodium phosphate, 5% D2O; 1.1 mM 15N labeled peptide)

References:
  1. Greenfield NJ, Kostyukova AS, Hitchcock-DeGregori SE. "Structure and tropomyosin binding properties of the N-terminal capping domain of tropomodulin 1." Biophys J. 2005; 88(1): 372-83. PubMed: 15475586

  2. Kostyukova AS, Tiktopulo EI, Maeda Y. "Folding properties of functional domains of tropomodulin." Biophys J. 2001; 81(1): 345-51. PubMed: 11423419

Comments:
 



References

  1. Fischer RS, Fowler VM. "Tropomodulins: life at the slow end." Trends Cell Biol. 2003; 13(11): 593-601. PubMed: 14573353


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