Annotations for this protein have been verified by the authors of the corresponding papers



DP00465: Uncharacterized protein MJ0246FASTA viewXML view

General information
DisProt:DP00465
Name:Uncharacterized protein MJ0246
Synonym(s):Y246_METJA
First appeared in release:Release 3.1 (03/31/2006)
UniProt:Q57696
UniGene: 
SwissProt: Y246_METJA
TrEMBL:  
NCBI (GI): 2495875
Source organism:Methanocaldococcus jannaschii (Methanococcus jannaschii)
Sequence length:99
Percent disordered:100%
Homologues: 


Native sequence

        10         20         30         40         50         60
         |          |          |          |          |          |
MIEKLAEIRK KIDEIDNKIL KLIAERNSLA KDVAEIKNQL GIPINDPERE KYIYDRIRKL - 60
CKEHNVDENI GIKIFQILIE HNKALQKQYL EETQNKNKK

Region 1: 1-99

Map of ordered and disordered regions







Note: 'Mouse' over a region to see the start and stop residues. Click on a region to see detailed information.


Region 1
Type:Disordered - Molten Globule
Name: 
Location:1 - 99
Length:99
Region sequence:

MIEKLAEIRKKIDEIDNKILKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKL
CKEHNVDENIGIKIFQILIEHNKALQKQYLEETQNKNKK

Modification type: Engineered
Monomeric
PDB:  
Structural/functional type: Function arises via a disorder to order transition
Functional classes: Modification site
Functional subclasses: Substrate/ligand binding
Detection methods:
  1. Nuclear magnetic resonance (NMR) (293 K; pH: 6.5; sodium chloride 50 mM; sodium phosphate 20 mM)

  2. Circular dichroism (CD) spectroscopy, near-UV (293 K; )

  3. Fluorescence polarization/anisotropy (293 K; ANS 2 uM)

  4. Hydrogen-deuterium exchange (298 K; D2O (pD 7.4); NaCl (pH 6.7) 40 mM; sodium phosphate 2.5 mM)

  5. Mass spectrometry-based high resolution hydrogen-deuterium exchange

References:
  1. MacBeath G, Kast P, Hilvert D. "Redesigning enzyme topology by directed evolution." Science. 1998; 279(5358): 1958-61. PubMed: 9506949

  2. Vamvaca K, Vogeli B, Kast P, Pervushin K, Hilvert D. "An enzymatic molten globule: efficient coupling of folding and catalysis." Proc Natl Acad Sci U S A. 2004; 101(35): 12860-4. PubMed: 15322276

Comments:
In the Vamvaca et al. paper, the six terminal amino acid residues of the protein were replaced by the following sequence: LEHHHHHH.



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