DP00636: Kinesin-like protein bimCFASTA viewXML view

General information
DisProt:DP00636
Name:Kinesin-like protein bimC
Synonym(s):BIMC_EMENI
BimC
First appeared in release:Release 5.2 (08/07/2010)
UniProt:P17120
UniGene: 
SwissProt: BIMC_EMENI
TrEMBL:  
NCBI (GI):  
Source organism:Emericella nidulans (Aspergillus nidulans)
Sequence length:1184
Percent disordered:6%
Homologues: 


Native sequence

        10         20         30         40         50         60
         |          |          |          |          |          |
MAGPQRATSG LPTRRTTTRQ PTRRAGSAIP ERQTSTASPA VSTKTAAISR TRTLKSPGEP - 60
ASVLAKRKER DIEREINEDT SIHVVVRCRG RNEREVKENS GVVLQTEGVK GKTVELSMGP - 120
NAVSNKTYTF DKVFSAAADQ ITVYEDVVLP IVTEMLAGYN CTIFAYGQTG TGKTYTMSGD - 180
MTDTLGILSD NAGIIPRVLY SLFAKLADTE STVKCSFIEL YNEELRDLLS AEENPKLKIY - 240
DNEQKKGHMS TLVQGMEETY IDSATAGIKL LQQGSHKRQV AATKCNDLSS RSHTVFTITV - 300
NIKRTTESGE EYVCPGKLNL VDLAGSENIG RSGAENKRAT EAGLINKSLL TLGRVINALV - 360
DKSQHIPYRE SKLTRLLQDS LGGRTKTCII ATISPARSNL EETISTLDYA FRAKNIRNKP - 420
QINSTMPKMT LLREFTAEIE KLKAELIATR HRNGVYMSVE SYEEMKMENE SRRIISEEQR - 480
AKIESMESSL RHKVQELLTL TSKFNDLKKD NDDTLAALCS TNDVLQQTDI VLQNTRAQLE - 540
EEEMLRCAHE ETEHQLQDVG KGLISTLGQT VEDINSLQSK LDRKAELDAT NAELWRASST - 600
EVSDVTKRID QRVEAFQTRH AKLLETTSVK VNEFIATEIS NIERTRSDLS EYNRSLDAAC - 660
NNAKAETSSA HEDMNNVLEE IKDLREEVKS KVGEGLNGLS AAAARISEEV IGEFTQLHSQ - 720
LHTSFNNLGK DLKSIFETMA THLSEQKNEI NRLRAELQSS NRQNIETTHK ASAHLAQAIE - 780
EEHVAAEAER EILMSQIKAL VEESRQKQFA RLRAKIDGVR TEISASGDML EQATTQHDRQ - 840
IDEWVFKSEQ FAKDVNASKD EIRTKLQNDW EAFDQRNSTI RKATESVHKE TVRIVDVQVD - 900
DMGRQMEALD DFVAKARSQN GRYRDAHIAT LDTIATGVRD SYSSIEGRVE NLTGRMNQFQ - 960
QEATHHHATL EESIAPLSND VRKPLTDLSS SFQNRSLEEY VATGVTPKKR KYDYISVLPS - 1020
TESHEVLKSR LRTTKEMEVL PFNSDDQLSG PSSSPGGSPS KGFVYNDVED EVGTHAPTVT - 1080
NVNPSNTGLR EVDANVAARP LVYSTGEKST DQDGSPVVSP DSATEAEGMN GPPSKRRRSN - 1140
SVVADTKLPN KMLARRMAGM MEGRENVPPP GISNGRRLRG RPSP



Functional narrative    

Important role in mitotic dividing cells. Microtubule motor required for spindle body separation.

Region 1: 1-71

Map of ordered and disordered regions







Note: 'Mouse' over a region to see the start and stop residues. Click on a region to see detailed information.


Region 1
Type:Disordered - Extended
Name:N-terminal extension (Nte)
Location:1 - 71
Length:71
Region sequence:

MAGPQRATSGLPTRRTTTRQPTRRAGSAIPERQTSTASPAVSTKTAAISRTRTLKSPGEP
ASVLAKRKERD

Modification type: Fragment
Native
PDB:  
Structural/functional type: Function arises from the disordered state
Functional classes: Molecular recognition effectors
Molecular assembly
Functional subclasses: Flexible linkers/spacers
Protein-protein binding
Detection methods:
  1. Analytical ultracentrifugation (277 K; pH: 6.9; A25 buffer; KCl 25 mM; NaCl 200 mM; sucrose gradient (9-20%); TM-Nte (Nte fused to thioredoxin))

  2. Size exclusion/gel filtration chromatography

References:
  1. Stock MF, Chu J, Hackney DD. "The kinesin family member BimC contains a second microtubule binding region attached to the N terminus of the motor domain." J Biol Chem. 2003; 278(52): 52315-22. PubMed: 14530265

Comments:
Stock, et al. (2003) found that the N-terminal extension (Nte) increased binding to the mictotubule (MT), ostensibly to "tether the motor domain to the MT while still allowing any conformational changes of the motor domain that are needed to produce rapid motitlity."


The N-terminal extension of BimC is present in A. nidulans, but generally not present in other members of the N-terminal motor proteins.




References

  1. Stock MF, Chu J, Hackney DD. "The kinesin family member BimC contains a second microtubule binding region attached to the N terminus of the motor domain." J Biol Chem. 2003; 278(52): 52315-22. PubMed: 14530265



Comments


AV (7-28-2010) PubMed: 14530265


If you have any comments or wish to provide additional references to this protein or its disordered region(s), please click here to e-mail us.


Disprot-footer
Contact us