Annotation for this protein is in progress - please check future releases for more complete information


DP00257: Superoxide dismutase-like protein yojMFASTA viewXML view

General information
DisProt:DP00257
Name:Superoxide dismutase-like protein yojM
Synonym(s):YOJM_BACSU
First appeared in release:Release 3.0 (02/17/2006)
UniProt:O31851
UniGene: 
SwissProt: YOJM_BACSU
TrEMBL:  
NCBI (GI): 12230851
Source organism:Bacillus subtilis
Sequence length:196
Percent disordered:28%
Homologues: 


Native sequence

        10         20         30         40         50         60
         |          |          |          |          |          |
MHRLLLLMML TALGVAGCGQ KKPPDPPNRV PEKKVVETSA FGHHVQLVNR EGKAVGFIEI - 60
KESDDEGLDI HISANSLRPG ASLGFHIYEK GSCVRPDFES AGGPFNPLNK EHGFNNPMGH - 120
HAGDLPNLEV GADGKVDVIM NAPDTSLKKG SKLNILDEDG SAFIIHEQAD DYLTNPSGNS - 180
GARIVCGALL GNNEKQ

Region 1: 35-39 Region 2: 89-125 Region 3: 172-177 Region 4: 191-196

Map of ordered and disordered regions







Note: 'Mouse' over a region to see the start and stop residues. Click on a region to see detailed information.


Region 1
Type:Disordered
Name: 
Location:35 - 39
Length:5
Region sequence:

VVETS

Modification type: Fragment
Monomeric
PDB:  
Structural/functional type: Function arises via a disorder to order transition
Functional classes:  
Functional subclasses: Metal binding
Detection methods:
  1. Nuclear magnetic resonance (NMR) (298 K; )

  2. X-ray crystallography (100 K; )
References:
  1. Banci L, Bertini I, Calderone V, Cramaro F, Del Conte R, Fantoni A, Mangani S, Quattrone A, Viezzoli MS. "A prokaryotic superoxide dismutase paralog lacking two Cu ligands: From largely unstructured in solution to ordered in the crystal." Proc Natl Acad Sci U S A. 2005; 102(21): 7541-6. PubMed: 15897454
Comments:
 



Region 2
Type:Disordered
Name:Long loop IV
Location:89 - 125
Length:37
Region sequence:

EKGSCVRPDFESAGGPFNPLNKEHGFNNPMGHHAGDL

Modification type: Fragment
Monomeric
PDB:  
Structural/functional type: Function arises via a disorder to order transition
Functional classes:  
Functional subclasses: Metal binding
Detection methods:
  1. Nuclear magnetic resonance (NMR) (298 K; )

  2. X-ray crystallography (100 K; )
References:
  1. Banci L, Bertini I, Calderone V, Cramaro F, Del Conte R, Fantoni A, Mangani S, Quattrone A, Viezzoli MS. "A prokaryotic superoxide dismutase paralog lacking two Cu ligands: From largely unstructured in solution to ordered in the crystal." Proc Natl Acad Sci U S A. 2005; 102(21): 7541-6. PubMed: 15897454
Comments:
 



Region 3
Type:Disordered
Name:Electrostatic loop VII
Location:172 - 177
Length:6
Region sequence:

YLTNPS

Modification type: Fragment
Monomeric
PDB:  
Structural/functional type: Function arises via a disorder to order transition
Functional classes:  
Functional subclasses: Metal binding
Detection methods:
  1. Nuclear magnetic resonance (NMR) (298 K; )

  2. X-ray crystallography (100 K; )
References:
  1. Banci L, Bertini I, Calderone V, Cramaro F, Del Conte R, Fantoni A, Mangani S, Quattrone A, Viezzoli MS. "A prokaryotic superoxide dismutase paralog lacking two Cu ligands: From largely unstructured in solution to ordered in the crystal." Proc Natl Acad Sci U S A. 2005; 102(21): 7541-6. PubMed: 15897454
Comments:
 



Region 4
Type:Disordered
Name: 
Location:191 - 196
Length:6
Region sequence:

GNNEKQ

Modification type: Fragment
Monomeric
PDB:  
Structural/functional type: Function arises via a disorder to order transition
Functional classes:  
Functional subclasses: Metal binding
Detection methods:
  1. Nuclear magnetic resonance (NMR) (298 K; )

  2. X-ray crystallography (100 K; )
References:
  1. Banci L, Bertini I, Calderone V, Cramaro F, Del Conte R, Fantoni A, Mangani S, Quattrone A, Viezzoli MS. "A prokaryotic superoxide dismutase paralog lacking two Cu ligands: From largely unstructured in solution to ordered in the crystal." Proc Natl Acad Sci U S A. 2005; 102(21): 7541-6. PubMed: 15897454
Comments:
 


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