Annotation for this protein is in progress - please check future releases for more complete information



DP00271: RhodopsinFASTA viewXML view

General information
DisProt:DP00271
Name:Rhodopsin
Synonym(s):OPSD_BOVIN
First appeared in release:Release 3.0 (02/17/2006)
UniProt:P02699
UniGene:Bt.12753
SwissProt: OPSD_BOVIN
TrEMBL:  
NCBI (GI): 129204
Source organism:Bos taurus (Bovine)
Sequence length:348
Percent disordered:14%
Homologues: 


Native sequence

        10         20         30         40         50         60
         |          |          |          |          |          |
MNGTEGPNFY VPFSNKTGVV RSPFEAPQYY LAEPWQFSML AAYMFLLIML GFPINFLTLY - 60
VTVQHKKLRT PLNYILLNLA VADLFMVFGG FTTTLYTSLH GYFVFGPTGC NLEGFFATLG - 120
GEIALWSLVV LAIERYVVVC KPMSNFRFGE NHAIMGVAFT WVMALACAAP PLVGWSRYIP - 180
EGMQCSCGID YYTPHEETNN ESFVIYMFVV HFIIPLIVIF FCYGQLVFTV KEAAAQQQES - 240
ATTQKAEKEV TRMVIIMVIA FLICWLPYAG VAFYIFTHQG SDFGPIFMTI PAFFAKTSAV - 300
YNPVIYIMMN KQFRNCMVTT LCCGKNPLGD DEASTTVSKT ETSQVAPA

Region 3: 133-137 Region 4: 207-222 Region 1: 236-239 Region 2: 328-333 Region 5: 327-348

Map of ordered and disordered regions







Note: 'Mouse' over a region to see the start and stop residues. Click on a region to see detailed information.


Region 1
Type:Disordered
Name: 
Location:236 - 239
Length:4
Region sequence:

QQQE

Modification type:  
PDB:  
Structural/functional type: Relationship to function unknown
Functional classes:  
Functional subclasses:  
Detection methods:
  1. X-ray crystallography

References:
  1. Palczewski K, Kumasaka T, Hori T, Behnke CA, Motoshima H, Fox BA, Le Trong I, Teller DC, Okada T, Stenkamp RE, Yamamoto M, Miyano M. "Crystal structure of rhodopsin: A G protein-coupled receptor." Science. 2000; 289(5480): 739-45. PubMed: 10926528

Comments:
 



Region 2
Type:Disordered
Name: 
Location:328 - 333
Length:6
Region sequence:

LGDDEA

Modification type:  
PDB:  
Structural/functional type:  
Functional classes:  
Functional subclasses:  
Detection methods:
  1. X-ray crystallography

References:
  1. Palczewski K, Kumasaka T, Hori T, Behnke CA, Motoshima H, Fox BA, Le Trong I, Teller DC, Okada T, Stenkamp RE, Yamamoto M, Miyano M. "Crystal structure of rhodopsin: A G protein-coupled receptor." Science. 2000; 289(5480): 739-45. PubMed: 10926528

Comments:
 



Region 3
Type:Disordered
Name: 
Location:133 - 137
Length:5
Region sequence:

IERYV

Modification type:  
PDB:  
Structural/functional type:  
Functional classes:  
Functional subclasses:  
Detection methods:
  1. X-ray crystallography

References:
  1. Palczewski K, Kumasaka T, Hori T, Behnke CA, Motoshima H, Fox BA, Le Trong I, Teller DC, Okada T, Stenkamp RE, Yamamoto M, Miyano M. "Crystal structure of rhodopsin: A G protein-coupled receptor." Science. 2000; 289(5480): 739-45. PubMed: 10926528

Comments:
 



Region 4
Type:Disordered
Name: 
Location:207 - 222
Length:16
Region sequence:

MFVVHFIIPLIVIFFC

Modification type:  
PDB:  
Structural/functional type:  
Functional classes:  
Functional subclasses:  
Detection methods:
  1. X-ray crystallography

References:
  1. Palczewski K, Kumasaka T, Hori T, Behnke CA, Motoshima H, Fox BA, Le Trong I, Teller DC, Okada T, Stenkamp RE, Yamamoto M, Miyano M. "Crystal structure of rhodopsin: A G protein-coupled receptor." Science. 2000; 289(5480): 739-45. PubMed: 10926528

Comments:
 



Region 5
Type:Disordered
Name: 
Location:327 - 348
Length:22
Region sequence:

PLGDDEASTTVSKTETSQVAPA

Modification type:  
PDB:  
Structural/functional type:  
Functional classes:  
Functional subclasses:  
Detection methods:
  1. X-ray crystallography

References:
  1. Palczewski K, Kumasaka T, Hori T, Behnke CA, Motoshima H, Fox BA, Le Trong I, Teller DC, Okada T, Stenkamp RE, Yamamoto M, Miyano M. "Crystal structure of rhodopsin: A G protein-coupled receptor." Science. 2000; 289(5480): 739-45. PubMed: 10926528

Comments:
 


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