Annotation for this protein is in progress - please check future releases for more complete information


DP00434: UPF0424 protein At3g04780FASTA viewXML view

General information
DisProt:DP00434
Name:UPF0424 protein At3g04780
Synonym(s):Y3478_ARATH
First appeared in release:Release 3.0 (02/17/2006)
UniProt:Q9SQZ9
UniGene:At.26620
SwissProt: Y3478_ARATH
TrEMBL:  
NCBI (GI): 85701293
Source organism:Arabidopsis thaliana (Mouse-ear cress)
Sequence length:176
Percent disordered:5%
Homologues: 


Native sequence

        10         20         30         40         50         60
         |          |          |          |          |          |
MSAESASQIP KGQVDLLDFI DWSGVECLNQ SSSHSLPNAL KQGYREDEGL NLESDADEQL - 60
LIYIPFNQVI KLHSFAIKGP EEEGPKTVKF FSNKEHMCFS NVNDFPPSDT AELTEENLKG - 120
KPVVLKYVKF QNVRSLTIFI EANQSGSEVT KVQKIALYGS TVETTDMKGL KKIEDH

Region 1: 2-9

Map of ordered and disordered regions







Note: 'Mouse' over a region to see the start and stop residues. Click on a region to see detailed information.


Region 1
Type:Disordered
Name: 
Location:2 - 9
Length:8
Region sequence:

SAESASQI

Modification type: Engineered
PDB:  
Structural/functional type: Relationship to function unknown
Functional classes: Unknown
Functional subclasses: Unknown
Detection methods:
  1. Nuclear magnetic resonance (NMR) (298 K; )
References:
  1. Song J, Tyler RC, Wrobel RL, Frederick RO, Vojtek FC, Jeon WB, Lee MS, Markley JL. "Solution structure of At3g04780.1-des15, an Arabidopsis thaliana ortholog of the C-terminal domain of human thioredoxin-like protein." Protein Sci. 2005; 14(4): 1059-63. PubMed: 15741346
Comments:
 



Comments


This protein used in this experiment was based on the original sequence for At3g04780.1. See the Song et al. article for a full description of the materials and methods.


The Song et al. paper refers to "flexible loops flanking sheet C as well as loops encompassing sheets A and B". However, specific residues were not specified and were unable to be located


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