General information | DisProt: | DP00499 | Name: | C-terminal-binding protein 1 | Synonym(s): | CTBP1_RAT
CtBP1
C-terminal-binding protein 3
CtBP3
50 kDa BFA-dependent ADP-ribosylation substrate
BARS-50
| First appeared in release: | Release 3.2 (05/26/2006) | UniProt: | Q9Z2F5 | UniGene: | Rn.3946 | SwissProt: | CTBP1_RAT | TrEMBL: | | NCBI (GI): | 14194487 | Source organism: | Rattus norvegicus (Rat) | Sequence length: | 430 | Percent disordered: | 20% | Homologues: | |
Native sequence |
10 20 30 40 50 60 | | | | | | MSGVRPPIMN GPMHPRPLVA LLDGRDCTVE MPILKDVATV AFCDAQSTQE IHEKVLNEAV - 60 GALMYHTITL TREDLEKFKA LRIIVRIGSG FDNIDIKSAG DLGIAVCNVP AASVEETADS - 120 TLCHILNLYR RTTWLHQALR EGTRVQSVEQ IREVASGAAR IRGETLGIIG LGRVGQAVAL - 180 RAKAFGFNVL FYDPYLSDGI ERALGLQRVS TLQDLLFHSD CVTLHCGLNE HNHHLINDFT - 240 VKQMRQGAFL VNTARGGLVD EKALAQALKE GRIRGAALDV HESEPFSFSQ GPLKDAPNLI - 300 CTPHAAWYSE QASIEMREEA AREIRRAITG RIPDSLKNCV NKDHLTAATH WASMDPAVVH - 360 PELNGAAYSR YPPGVVSVAP TGIPAAVEGI VPSAMSLSHG LPPVAHPPHA PSPGQTVKPE - 420 ADRDHTTDQL
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Functional narrative |
C-terminal binding proteins (CtBPs) belong to a recently discovered protein family, hosting isoforms CtBP1, 2, and 3, that show distinct functions according to their cellular localization. In the nucleus, CtBPs act as transcriptional corepressors, targeting DNA-binding proteins. Two-hybrid screens have been identified in Drosophila and mammals about three dozen CtBP-interacting transcription factors. CtBP corepressor activity has been proposed to rely on its ability to oligomerize, thus acting as a scaffold in the formation of a multiprotein complex that hosts the essential components of both gene targeting and coordinated histone modifications, thus allowing repression of the targeted genes. In isolated Golgi apparatus the CtBP3 isoform (previously known as BARS [Brefeldin A-ADP Ribosylated Substrate] and recently renamed as short-CtBP1 or CtBP1-S) has been shown to be a key component of the machinery controlling Golgi tubule fission. The CtBP fission inducing activity was shown to participate in the fragmentation of the Golgi complex during mitosis and in intracellular membrane traffic. Thus, based on its ability to fulfill different functions depending on cellular localization, CtBP has been described as a moonlighting protein. Involved in controlling the equilibrium between tubular and stacked structures in the Golgi complex. Corepressor targeting diverse transcription regulators such as GLIS2. Has dehydrogenase activity. Functions in brown adipose tissue (BAT) differentiation.
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Map of ordered and disordered regions |
Note: 'Mouse' over a region to see the start and stop residues. Click on a region to see detailed information.
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Region 1 | Type: | Disordered | Name: | C-terminal region | Location: | 345 - 430 | Length: | 86 | Region sequence: |
LTAATHWASMDPAVVHPELNGAAYSRYPPGVVSVAPTGIPAAVEGIVPSAMSLSHGLPPV AHPPHAPSPGQTVKPEADRDHTTDQL | Modification type: | Fragment
Native
| PDB: | | Structural/functional type: | Function arises from the disordered state | Functional classes: | Modification site
| Functional subclasses: | Nuclear localization
Phosphorylation
| Detection methods:
- Nuclear magnetic resonance (NMR) (298 K; pH: 6.6; 10.7 mg/mL protein; 10 mM potassium phosphate, 8% D2O,)
- Circular dichroism (CD) spectroscopy, far-UV (293 K; pH: 7.4; 0.17 mg/mL protein; 0.1-cm path length; PBS, 25% glycerol)
- Small-angle X-ray scattering (SAXS) (2.0, 4.0, 5.2, and 8.0 mg/mL protein; linear proportional gas detector; sample-detector distance 2.4 m)
| References:
- Nardini M, Svergun D, Konarev PV, Spano S, Fasano M, Bracco C, Pesce A, Donadini A, Cericola C, Secundo F, Luini A, Corda D, Bolognesi M. "The C-terminal domain of the transcriptional corepressor CtBP is intrinsically unstructured." Protein Sci. 2006; 15(5): 1042-50. PubMed: 16597837
| Comments:
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References |
- Corda D, Colanzi A, Luini A. "The multiple activities of CtBP/BARS proteins: the Golgi view." Trends Cell Biol. 2006; 16(3): 167-73. PubMed: 16483777
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