Bibliography |
This bibliography includes all the papers referenced by DisProt, papers that have cited several key references on disordered proteins, and additional papers found by key word searches. The list is sorted by the first author's last name. Click here to see the distribution per year of the papers in the bibliography.
Last update on June 23rd, 2006. Total number of papers in this bibliography: 2785.
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Aaron BM, Oikawa K, Reithmeier RA, Sykes BD. "Characterization of skeletal muscle calsequestrin by 1H NMR spectroscopy." J Biol Chem. 1984; 259(19): 11876-81. PMID: 6480588 |
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Ababou A, Ladbury JE. "Survey of the year 2004: literature on applications of isothermal titration calorimetry." J Mol Recognit. 2006; 19(1): 79-89. PMID: 16220545 j.ladbury@biochem.ucl.ac.uk |
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Abad-Zapatero C, Abdel-Meguid SS, Johnson JE, Leslie AG, Rayment I, Rossmann MG, Suck D, Tsukihara T. "Structure of southern bean mosaid virus at 2.8 A resolution." Nature. 1980; 286(5768): 33-9. PMID: 19711553 |
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Abajian C, Rosenzweig AC. "Crystal structure of yeast Sco1." J Biol Inorg Chem. 2006; 11(4): 459-66. PMID: 16570183 |
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Abajian C, Yatsunyk LA, Ramirez BE, Rosenzweig AC. "Yeast cox17 solution structure and Copper(I) binding." J Biol Chem. 2004; 279(51): 53584-92. PMID: 15465825 |
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Abdi KM, Mohler PJ, Davis JQ, Bennett V. "Isoform specificity of ankyrin-B: A site in the divergent C-terminal domain is required for intramolecular association." J Biol Chem. 2006; 281(9): 5741-9. PMID: 16368689 |
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Abedini A, Raleigh DP. "Destabilization of human IAPP amyloid fibrils by proline mutations outside of the putative amyloidogenic domain: is there a critical amyloidogenic domain in human IAPP?" J Mol Biol. 2006; 355(2): 274-81. PMID: 16303136 |
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Abendroth J, Rice AE, McLuskey K, Bagdasarian M, Hol WG. "The crystal structure of the periplasmic domain of the type II secretion system protein EpsM from Vibrio cholerae: the simplest version of the ferredoxin fold." J. Mol. Biol.. 2004; 338(3): 585-96. PMID: 15081815 |
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Abercrombie BD, Kneale GG, Crane-Robinson C, Bradbury EM, Goodwin GH, Walker JM, Johns EW. "Studies on the conformational properties of the high-mobility-group chromosomal protein HMG 17 and its interaction with DNA." Eur J Biochem. 1978; 84(1): 173-7. PMID: 565710 |
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Abergel C, Rudinger-Thirion J, Giegé R, Claverie JM. "Virus-encoded aminoacyl-tRNA synthetases: structural and functional characterization of mimivirus TyrRS and MetRS." J. Virol.. 2007; 81(22): 12406-17. PMID: 17855524 |
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Abian O, Neira JL, Velazquez-Campoy A. "Thermodynamics of zinc binding to hepatitis C virus NS3 protease: a folding by binding event." Proteins. 2009; 77(3): 624-36. PMID: 19536779 |
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Abramczyk D, Tchorzewski M, Krokowski D, Boguszewska A, Grankowski N. "Overexpression, purification and characterization of the acidic ribosomal P-proteins from Candida albicans." Biochim Biophys Acta. 2004; 1672(3): 214-23. PMID: 15182941 |
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Abramson J, Riistama S, Larsson G, Jasaitis A, Svensson-Ek M, Laakkonen L, Puustinen A, Iwata S, Wikstrom M. "The structure of the ubiquinol oxidase from Escherichia coli and its ubiquinone binding site." Nat Struct Biol. 2000; 7(10): 910-7. PMID: 11017202 |
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Absmanner B, Schmeiser V, Kampf M, Lehle L. "Biochemical characterization, membrane association and identification of amino acids essential for function of Alg11 from Saccharomyces cerevisiae, an alpha1,2-mannosyltransferase, catalyzing two sequential glycosylation steps in the formation of the lipid-linked core oligosaccharide." Biochem J. 2010; 426(2): 205-17. PMID: 19929855 |
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AbuKhader M, Heap J, De Matteis C, Kellam B, Doughty SW, Minton N, Paoli M. "Binding of the anticancer prodrug CB1954 to the activating enzyme NQO2 revealed by the crystal structure of their complex." J. Med. Chem.. 2005; 48(24): 7714-9. PMID: 16302811 |
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Acevedo ML, Arbildúa JJ, Monasterio O, Toledo H, León O. "Role of the 207-218 peptide region of Moloney murine leukemia virus integrase in enzyme catalysis." Arch Biochem Biophys. 2009. PMID: 20026028 |
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Acharya R, Fry E, Stuart D, Fox G, Rowlands D, Brown F. "The three-dimensional structure of foot-and-mouth disease virus at 2.9 A resolution." Nature. 1989; 337(6209): 709-16. PMID: 2537470 |
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Adams VH, McBryant SJ, Wade PA, Woodcock CL, Hansen JC. "Intrinsic disorder and autonomous domain function in the multifunctional nuclear protein, MeCP2." J Biol Chem. 2007; 282(20): 15057-64. PMID: 17371874 |
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Addlagatta A, Krzywda S, Czapinska H, Otlewski J, Jaskolski M. "Ultrahigh-resolution structure of a BPTI mutant." Acta Crystallogr. D Biol. Crystallogr.. 2001; 57(Pt 5): 649-63. PMID: 11320305 |
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Adekambi T, Berger P, Raoult D, Drancourt M. "rpoB gene sequence-based characterization of emerging non-tuberculous mycobacteria with descriptions of Mycobacterium bolletii sp. nov., Mycobacterium phocaicum sp. nov. and Mycobacterium aubagnense sp. nov." Int J Syst Evol Microbiol. 2006; 56(Pt 1): 133-43. PMID: 16403878 |
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Adikesavan Nallini Vijayarangan, Mahmood Syed Saad, Stanley Nithianantham, Xu Zhen, Wu Nan, Thibonnier Marc, Shoham Menachem. "A C-terminal segment of the V1R vasopressin receptor is unstructured in the crystal structure of its chimera with the maltose-binding protein." Acta Crystallographica Section F. 2005; 61(4): 341-345. |
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Adinolfi S, Bagni C, Musco G, Gibson T, Mazzarella L, Pastore A. "Dissecting FMR1, the protein responsible for fragile X syndrome, in its structural and functional domains." RNA. 1999; 5(9): 1248-58. PMID: 10496225 |
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Adkins JN, Lumb KJ. "Intrinsic structural disorder and sequence features of the cell cycle inhibitor p57Kip2." Proteins. 2002; 46(1): 1-7. PMID: 11746698 |
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Adkins NL, McBryant SJ, Johnson CN, Leidy JM, Woodcock CL, Robert CH, Hansen JC, Georgel PT. "Role of nucleic acid binding in Sir3p-dependent interactions with chromatin fibers." Biochemistry. 2009; 48(2): 276-88. PMID: 19099415 |
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Adman ET, Le Trong I, Stenkamp RE, Nieslanik BS, Dietze EC, Tai G, Ibarra C, Atkins WM. "Localization of the C-terminus of rat glutathione S-transferase A1-1: crystal structure of mutants W21F and W21F/F220Y." Proteins. 2001; 42(2): 192-200. PMID: 11119643 |
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AEvarsson A, Brazhnikov E, Garber M, Zheltonosova J, Chirgadze Y, al-Karadaghi S, Svensson LA, Liljas A. "Three-dimensional structure of the ribosomal translocase: elongation factor G from Thermus thermophilus." EMBO J. 1994; 13(16): 3669-77. PMID: 8070397 |
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Agalarov SC, Sridhar Prasad G, Funke PM, Stout CD, Williamson JR. "Structure of the S15,S6,S18-rRNA complex: assembly of the 30S ribosome central domain." Science. 2000; 288(5463): 107-13. PMID: 10753109 |
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Agarkova I, Auerbach D, Ehler E, Perriard JC. "A novel marker for vertebrate embryonic heart, the EH-myomesin isoform." J Biol Chem. 2000; 275(14): 10256-64. PMID: 10744711 |
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Agarkova I, Perriard JC. "The M-band: an elastic web that crosslinks thick filaments in the center of the sarcomere." Trends Cell Biol. 2005; 15(9): 477-85. PMID: 16061384 irina.agarkova@cell.biol.ethz.ch |
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Agarwal R, Binz T, Swaminathan S. "Analysis of active site residues of botulinum neurotoxin E by mutational, functional, and structural studies: Glu335Gln is an apoenzyme." Biochemistry. 2005; 44(23): 8291-302. PMID: 15938619 |
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Agarwal R, Eswaramoorthy S, Kumaran D, Binz T, Swaminathan S. "Structural analysis of botulinum neurotoxin type E catalytic domain and its mutant Glu212-->Gln reveals the pivotal role of the Glu212 carboxylate in the catalytic pathway." Biochemistry. 2004; 43(21): 6637-44. PMID: 15157097 |
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Agianian B, Leonard K, Bonte E, Van der Zandt H, Becker PB, Tucker PA. "The glutamine-rich domain of the Drosophila GAGA factor is necessary for amyloid fibre formation in vitro, but not for chromatin remodelling." J Mol Biol. 1999; 285(2): 527-44. PMID: 9878427 |
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Aguado-Llera D, Goormaghtigh E, de Geest N, Quan XJ, Prieto A, Hassan BA, Gomez J, Neira JL. "The basic helix-loop-helix region of human neurogenin 1 is a monomeric natively unfolded protein which forms a "fuzzy" complex upon DNA binding." Biochemistry. . PMID: 20102160 |
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Ahmad B, Ansari MA, Sen P, Khan RH. "Low versus high molecular weight poly(ethylene glycol)-induced states of stem bromelain at low pH: stabilization of molten globule and unfolded states." Biopolymers. 2006; 81(5): 350-9. PMID: 16345002 |
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Ahmed FR, Rose DR, Evans SV, Pippy ME, To R. "Refinement of recombinant oncomodulin at 1.30 A resolution." J. Mol. Biol.. 1993; 230(4): 1216-24. PMID: 8487302 |
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Ahn VE, Faull KF, Whitelegge JP, Fluharty AL, Privé GG. "Crystal structure of saposin B reveals a dimeric shell for lipid binding." Proc. Natl. Acad. Sci. U.S.A.. 2002; 100(1): 38-43. PMID: 12518053 |
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Ahn VE, Leyko P, Alattia JR, Chen L, Privé GG. "Crystal structures of saposins A and C." Protein Sci.. 2006; 15(8): 1849-57. PMID: 16823039 |
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Ahuja HG, Felix CA, Aplan PD. "The t(11;20)(p15;q11) chromosomal translocation associated with therapy-related myelodysplastic syndrome results in an NUP98-TOP1 fusion." Blood. 1999; 94(9): 3258-3261. PMID: 10556215 |
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Ai S, Lu G, He Q, Li J. "Highly flexible polyelectrolyte nanotubes." J Am Chem Soc. 2003; 125(37): 11140-1. PMID: 16220903 |
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Aivazian D, Stern LJ. "Phosphorylation of T cell receptor zeta is regulated by a lipid dependent folding transition." Nat Struct Biol. 2000; 7(11): 1023-6. PMID: 11062556 |
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Akasaka K, Gyimesi-Forras K, Lammerhofer M, Fujita T, Watanabe M, Harada N, Lindner W. "Investigations of molecular recognition aspects related to the enantiomer separation of 2-methoxy-2-(1-naphthyl)propionic acid using quinine carbamate as chiral selector: An NMR and FT-IR spectroscopic as well as X-ray crystallographic study." Chirality. 2005; 17(9): 544-55. PMID: 16189833 |
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Akita M, Suzuki A, Kobayashi T, Ito S, Yamane T. "The first structure of pectate lyase belonging to polysaccharide lyase family 3." Acta Crystallogr. D Biol. Crystallogr.. 2001; 57(Pt 12): 1786-92. PMID: 11717490 |
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Al-Ali H, Rieger ME, Seldeen KL, Harris TK, Farooq A, Briegel KJ. "Biophysical characterization reveals structural disorder in the developmental transcriptional regulator LBH." Biochem Biophys Res Commun. 2010; 391(1): 1104-9. PMID: 20005203 |
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Albrecht M, Golatta M, Wüllner U, Lengauer T. "Structural and functional analysis of ataxin-2 and ataxin-3." Eur J Biochem. 2004; 271(15): 3155-70. PMID: 15265035 |
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Albrecht M, Hoffmann D, Evert BO, Schmitt I, Wullner U, Lengauer T. "Structural modeling of ataxin-3 reveals distant homology to adaptins." Proteins. 2003; 50(2): 355-70. PMID: 12486728 |
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Albright RA, Matthews BW. "Crystal structure of lambda-Cro bound to a consensus operator at 3.0 A resolution." J. Mol. Biol.. 1998; 280(1): 137-51. PMID: 9653037 |
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Alcaraz LA, del Alamo M, Barrera FN, Mateu MG, Neira JL. "Flexibility in HIV-1 assembly subunits: solution structure of the monomeric C-terminal domain of the capsid protein." Biophys. J.. 2007; 93(4): 1264-76. PMID: 11533199 |
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Alcaraz LA, Del Alamo M, Mateu MG, Neira JL. "Structural mobility of the monomeric C-terminal domain of the HIV-1 capsid protein." FEBS J.. 2008; 275(13): 3299-311. PMID: 18489586 |
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Alfano C, Sanfelice D, Babon J, Kelly G, Jacks A, Curry S, Conte MR. "Structural analysis of cooperative RNA binding by the La motif and central RRM domain of human La protein." Nat Struct Mol Biol. 2004; 11(4): 323-9. PMID: 15004549 sasi.conte@kcl.ac.uk |
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Alisaraie L, Haller LA, Fels G. "A QXP-Based Multistep Docking Procedure for Accurate Prediction of Protein-Ligand Complexes." J Chem Inf Model. 2006; 46(3): 1174-87. PMID: 16711737 |
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Ali T, Coles P, Stevens TJ, Stott K, Thomas JO. "Two homologous domains of similar structure but different stability in the yeast linker histone, Hho1p." J Mol Biol. 2004; 338(1): 139-48. PMID: 15050829 |
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Ali T, Thomas JO. "Distinct properties of the two putative "globular domains" of the yeast linker histone, Hho1p." J Mol Biol. 2004; 337(5): 1123-35. PMID: 15046982 |
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Alonso LG, Garcia-Alai MM, Nadra AD, Lapena AN, Almeida FL, Gualfetti P, Prat-Gay GD. "High-risk (HPV16) human papillomavirus E7 oncoprotein is highly stable and extended, with conformational transitions that could explain its multiple cellular binding partners." Biochemistry. 2002; 41(33): 10510-8. PMID: 12173938 |
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Alves VS, Castilho BA. "Gir2 is an intrinsically unstructured protein that is present in Saccharomyces cerevisiae as a group of heterogeneously electrophoretic migrating forms." Biochem Biophys Res Commun. 2005; 332(2): 450-5. PMID: 15896712 |
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Alves VS, Pimenta DC, Sattlegger E, Castilho BA. "Biophysical characterization of Gir2, a highly acidic protein of Saccharomyces cerevisiae with anomalous electrophoretic behavior." Biochem Biophys Res Commun. 2004; 314(1): 229-34. PMID: 14715270 |
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Amos FF, Evans JS. "AP7, a partially disordered pseudo C-RING protein, is capable of forming stabilized aragonite in vitro." Biochemistry. 2009; 48(6): 1332-9. PMID: 19159266 |
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Arold ST, Baur AS. "Dynamic Nef and Nef dynamics: how structure could explain the complex activities of this small HIV protein." Trends Biochem Sci. 2001; 26(6): 356-63. PMID: 11406408 |
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