This bibliography includes all the papers referenced by DisProt, papers that have cited several key references on disordered proteins, and additional papers found by key word searches. The list is sorted by the first author's last name. Click here to see the distribution per year of the papers in the bibliography.
Last update on June 23rd, 2006. Total number of papers in this bibliography: 2785.

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Yagi H, Kusaka E, Hongo K, Mizobata T, Kawata Y. "Amyloid fibril formation of alpha-synuclein is accelerated by preformed amyloid seeds of other proteins: implications for the mechanism of transmissible conformational diseases." J Biol Chem. 2005; 280(46): 38609-16. PMID: 16162499
Yamada Y, Nakagawa K, Yajima T, Saito K, Tokushima A, Fujiwara K, Ikeguchi M. "Structural and thermodynamic consequences of removal of a conserved disulfide bond from equine beta-lactoglobulin." Proteins. 2006; 63(3): 595-602. PMID: 16463267
Yamaguchi S, Yoshimura I, Kohira T, Tamaru S, Hamachi I. "Cooperation between artificial receptors and supramolecular hydrogels for sensing and discriminating phosphate derivatives." J Am Chem Soc. 2005; 127(33): 11835-41. PMID: 16104762
Yamamoto A, Guacci V, Koshland D. "Pds1p is required for faithful execution of anaphase in the yeast, Saccharomyces cerevisiae." J Cell Biol. 1996; 133(1): 85-97. PMID: 8601616
Yamamoto F, Clausen H, White T, Marken J, Hakomori S. "Molecular genetic basis of the histo-blood group ABO system." Nature. 1990; 345(6272): 229-33. PMID: 2333095
Yamamoto F, Hakomori S. "Sugar-nucleotide donor specificity of histo-blood group A and B transferases is based on amino acid substitutions." J Biol Chem. 1990; 265(31): 19257-62. PMID: 2121736
Yamamoto T, Yuyama K, Yamamoto H. "Low concentrations of nitric oxide (NO) induced cell death in PC12 cells through activation of p38 mitogen-activated protein kinase (p38 MAPK) but not via extracellular signal-regulated kinases (ERK1/2) or c-Jun N-terminal protein kinase (JNK)." Neurosci Lett. 2006; 392(3): 170-3. PMID: 16198052
Yamanaka MK, Saugstad JA, Hanson-Painton O, McCarthy BJ, Tobin SL. "Structure and expression of the Drosophila calmodulin gene." Nucleic Acids Res. 1987; 15(8): 3335-48. PMID: 3106931
Yamauchi E, Nakatsu T, Matsubara M, Kato H, Taniguchi H. "Crystal structure of a MARCKS peptide containing the calmodulin-binding domain in complex with Ca2+-calmodulin." Nat Struct Biol. 2003; 10(3): 226-31. PMID: 12577052
Yamazaki T, Imae T, Sugimura H, Saito N, Hayashi K, Takai O. "Photolithographic patterning of dendrimer monolayers and pattern-selective adsorption of linear macromolecules." J Nanosci Nanotechnol. 2005; 5(11): 1792-800. PMID: 16433412
Yam CM, Pradier CM, Salmain M, Fischer-Durand N, Jaouen G. "Molecular Recognition of Avidin on Biotin-Functionalized Gold Surfaces Detected by FT-IRRAS and Use of Metal Carbonyl Probes." J Colloid Interface Sci. 2002; 245(1): 204-7. PMID: 16290351
Yamin G, Glaser CB, Uversky VN, Fink AL. "Certain metals trigger fibrillation of methionine-oxidized alpha-synuclein." J Biol Chem. 2003; 278(30): 27630-5. PMID: 12754258
Yamin G, Uversky VN, Fink AL. "Nitration inhibits fibrillation of human alpha-synuclein in vitro by formation of soluble oligomers." FEBS Lett. 2003; 542(1-3): 147-52. PMID: 12729915
Yanagihara I, Nakahira K, Yamane T, Kaieda S, Mayanagi K, Hamada D, Fukui T, Ohnishi K, Kajiyama S, Shimizu T, Sato M, Ikegami T, Ikeguchi M, Honda T, Hashimoto H. "Structure and functional characterization of Vibrio parahaemolyticus thermostable direct hemolysin." J. Biol. Chem.. 2010; 285(21): 16267-74. PMID: 20335168
Yanagisawa M, Hamada Y, Katsuragawa Y, Imamura M, Mikawa T, Masaki T. "Complete primary structure of vertebrate smooth muscle myosin heavy chain deduced from its complementary DNA sequence. Implications on topography and function of myosin." J Mol Biol. 1987; 198(2): 143-57. PMID: 2892941
Yang J, Cron P, Thompson V, Good VM, Hess D, Hemmings BA, Barford D. "Molecular mechanism for the regulation of protein kinase B/Akt by hydrophobic motif phosphorylation." Mol Cell. 2002; 9(6): 1227-40. PMID: 12086620
Yang J, Dunker AK, Powers JR, Clark S, Swanson BG. "Beta-lactoglobulin molten globule induced by high pressure." J Agric Food Chem. 2001; 49(7): 3236-43. PMID: 11453757
Yang J, Hurley TD, DePaoli-Roach AA. "Interaction of inhibitor-2 with the catalytic subunit of type 1 protein phosphatase. Identification of a sequence analogous to the consensus type 1 protein phosphatase-binding motif." J Biol Chem. 2000; 275(30): 22635-44. PMID: 10807923
Yang M, Nakazawa Y, Yamauchi K, Knight D, Asakura T. "Structure of model peptides based on Nephila clavipes dragline silk spidroin (MaSp1) studied by 13C cross polarization/magic angle spinning NMR." Biomacromolecules. 2005; 6(6): 3220-6. PMID: 16283749
Yang SA, Klee CB. "Low affinity Ca2+-binding sites of calcineurin B mediate conformational changes in calcineurin A." Biochemistry. 2000; 39(51): 16147-54. PMID: 11123943
Yang Y, Poncet J, Garnier J, Zatylny C, Bachere E, Aumelas A. "Solution structure of the recombinant penaeidin-3, a shrimp antimicrobial peptide." J Biol Chem. 2003; 278(38): 36859-67. PMID: 12842879
Yang Z, Kollman JM, Pandi L, Doolittle RF. "Crystal structure of native chicken fibrinogen at 2.7 A resolution." Biochemistry. 2001; 40(42): 12515-23. PMID: 11601975
Yang ZR, Thomson R, McNeil P, Esnouf RM. "RONN: the bio-basis function neural network technique applied to the detection of natively disordered regions in proteins." Bioinformatics. 2005; 21(16): 3369-76. PMID: 15947016
Yan RQ, Li XS, Yang TY, Xia C. "Structures and homology modeling of chicken major histocompatibility complex protein class I (BF2 and beta2m)." Mol Immunol. 2006; 43(7): 1040-6. PMID: 16112197
Yao J, Chung J, Eliezer D, Wright PE, Dyson HJ. "NMR structural and dynamic characterization of the acid-unfolded state of apomyoglobin provides insights into the early events in protein folding." Biochemistry. 2001; 40(12): 3561-71. PMID: 11297422
Yao W, Peng Y, Chen Q, Lin D. "1H, 13C, 15N backbone and side-chain resonance assignments of the Bright/ARID domain from the human histone demethylase JARID1B." Biomol NMR Assign. 2009; 3(1): 85-7. PMID: 19636953
Yao W, Peng Y, Lin D. "The flexible loop L1 of the H3K4 demethylase JARID1B ARID domain has a crucial role in DNA-binding activity." Biochem. Biophys. Res. Commun.. 2010; 396(2): 323-8. PMID: 20403335
Yao YX, Ren J, Heinen P, Zambon M, Jones IM. "Cleavage and serum reactivity of the severe acute respiratory syndrome coronavirus spike protein." J Infect Dis. 2004; 190(1): 91-8. PMID: 15195247
Yarmola EG, Parikh S, Bubb MR. "Formation and implications of a ternary complex of profilin, thymosin beta 4, and actin." J Biol Chem. 2001; 276(49): 45555-63. PMID: 11579089
Yatsunami K, Khorana HG. "GTPase of bovine rod outer segments: the amino acid sequence of the alpha subunit as derived from the cDNA sequence." Proc Natl Acad Sci U S A. 1985; 82(13): 4316-20. PMID: 2989813
Yazer MH, Denomme GA, Rose NL, Palcic MM. "Amino-acid substitution in the disordered loop of blood group B-glycosyltransferase enzyme causes weak B phenotype." Transfusion. 2005; 45(7): 1178-82. PMID: 15987364
Ye J, Mayer KL, Mayer MR, Stone MJ. "NMR solution structure and backbone dynamics of the CC chemokine eotaxin-3." Biochemistry. 2001; 40(26): 7820-7831. PMID: 11425309
Ye Y, Liu M, Kao JL, Marshall GR. "Novel trihydroxamate-containing peptides: design, synthesis, and metal coordination." Biopolymers. 2006. PMID: 16705688
Yi H, Wu LQ, Bentley WE, Ghodssi R, Rubloff GW, Culver JN, Payne GF. "Biofabrication with chitosan." Biomacromolecules. 2005; 6(6): 2881-94. PMID: 16283704
Yim HJ, Lok AS. "Natural history of chronic hepatitis B virus infection: What we knew in 1981 and what we know in 2005." Hepatology. 2006; 43(S1): S173-S181. PMID: 16447285
Ying M, Flatmark T. "Binding of the viral immunogenic octapeptide VSV8 to native glucose-regulated protein Grp94 (gp96) and its inhibition by the physiological ligands ATP and Ca." Febs J. 2006; 273(3): 513-22. PMID: 16420475
Yi Q, Baker D. "Direct evidence for a two-state protein unfolding transition from hydrogen-deuterium exchange, mass spectrometry, and NMR." Protein Sci. 1996; 5(6): 1060-1066. PMID: 8762137
Yiu CP, Beavil RL, Chan HY. "Biophysical characterisation reveals structural disorder in the nucleolar protein, Dribble." Biochem Biophys Res Commun. 2006; 343(1): 311-8. PMID: 16542639
Yong YH, Foegeding EA. "Caseins: Utilizing Molecular Chaperone Properties to Control Protein Aggregation in Foods." J Agric Food Chem. 2009. PMID: 20025277
Yoon MK, Shin J, Choi G, Choi BS. "Intrinsically unstructured N-terminal domain of bZIP transcription factor HY5." Proteins. 2006; 65(4): 856-66. PMID: 17001643
Yoo SH. "pH- and Ca(2+)-induced conformational change and aggregation of chromogranin B. Comparison with chromogranin A and implication in secretory vesicle biogenesis." J Biol Chem. 1995; 270(21): 12578-83. PMID: 7759505
Yoo SH. "Purification and pH-dependent secretory vesicle membrane binding of chromogranin B." Biochemistry. 1995; 34(27): 8680-6. PMID: 7612608
Yoo SH, Albanesi JP. "Ca2(+)-induced conformational change and aggregation of chromogranin A." J Biol Chem. 1990; 265(24): 14414-14421. PMID: 2387861
Yoo SH, Ferretti JA. "Nature of the pH-induced conformational changes and exposure of the C-terminal region of chromogranin A." FEBS Lett. 1993; 334(3): 373-377. PMID: 8243650
Yoo SH, Kang YK. "Identification of the secretory vesicle membrane binding region of chromogranin B." FEBS Lett. 1997; 406(3): 259-62. PMID: 9136897
Yoshikawa M, Kawamura K, Ejima A, Aoki T, Sakurai S, Hayashi K, Watanabe K. "Green polymers from Geobacillus thermodenitrificans DSM465--candidates for molecularly imprinted materials." Macromol Biosci. 2006; 6(3): 210-5. PMID: 16521082
You CC, De M, Rotello VM. "Monolayer-protected nanoparticle-protein interactions." Curr Opin Chem Biol. 2005; 9(6): 639-46. PMID: 16226485
Young MA, Shah NP, Chao LH, Seeliger M, Milanov ZV, Biggs WH 3rd, Treiber DK, Patel HK, Zarrinkar PP, Lockhart DJ, Sawyers CL, Kuriyan J. "Structure of the kinase domain of an imatinib-resistant Abl mutant in complex with the Aurora kinase inhibitor VX-680." Cancer Res. 2006; 66(2): 1007-14. PMID: 16424036
Yuan HS, Finkel SE, Feng JA, Kaczor-Grzeskowiak M, Johnson RC, Dickerson RE. "The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA binding." Proc Natl Acad Sci U S A. 1991; 88(21): 9558-62. PMID: 1946369
Yuan Z, Zhao J, Wang ZX. "Flexibility analysis of enzyme active sites by crystallographic temperature factors." Protein Eng. 2003; 16(2): 109-14. PMID: 12676979
Yu Y, Li S, Xu X, Li Y, Guan K, Arnold E, Ding J. "Structural basis for the unique biological function of small GTPase RHEB." J Biol Chem. 2005; 280(17): 17093-100. PMID: 15728574
Yuzawa S, Yokochi M, Hatanaka H, Ogura K, Kataoka M, Miura K, Mandiyan V, Schlessinger J, Inagaki F. "Solution structure of Grb2 reveals extensive flexibility necessary for target recognition." J Mol Biol. 2001; 306(3): 527-37. PMID: 11178911
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